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BaseInfo

ncRNA ID	novel_zma_miR5190
Species	Zea mays
Class	miRNA
Genome position	Chr3:16407239-16407322 [+]
Reference genome	RefGen_v4
Source	SRR2287164;SRR2287165
Length	22
Mature sequence(if miRNA)	1 - CCGGAGGGGAUUGAAGGAGAUU - 22
Stem-loop(if miRNA)	-     -        A     A                   A  CCGGA GGGGAUUG AGGAG UUAAAUCCCCUCCUAGUCA A  ||||| |||||||| ||||| |||||||||||||||||||  GGUCU CCCCUAGC UCCUC AAUUUAGGGGAGGAUCAGU A A     U        C     A                   A
Stem-loop sequence	CCGGAGGGGAUUGAAGGAGAUUAAAUCCCCUCCUAGUCAAAAAUGACUAGGAGGGGAUUUAAACUCCUCCGAUCCCCUUCUGGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT065170.1	ncRNA:22   UUAGAGGAAGUUAGGGGAGGCC   1   *|||*|||*||||||||||||| targets:684   UAUCCCCUCCAAUCCCCUCCGG   705 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0017F16 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008670893.2	ncRNA:22   UUAGAGGAAGUUAGGGGAGGCC   1   *|||*|||*||||||||||||| targets:1564   UAUCCCCUCCAAUCCCCUCCGG   1585 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC100382722 (LOC100382722), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_008670890.2	ncRNA:22   UUAGAGGAAGUUAGGGGAGGCC   1   *|||*|||*||||||||||||| targets:1584   UAUCCCCUCCAAUCCCCUCCGG   1605 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC100382722 (LOC100382722), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008670892.2	ncRNA:22   UUAGAGGAAGUUAGGGGAGGCC   1   *|||*|||*||||||||||||| targets:1608   UAUCCCCUCCAAUCCCCUCCGG   1629 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC100382722 (LOC100382722), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008670891.2	ncRNA:22   UUAGAGGAAGUUAGGGGAGGCC   1   *|||*|||*||||||||||||| targets:1641   UAUCCCCUCCAAUCCCCUCCGG   1662 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC100382722 (LOC100382722), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020547043.1	ncRNA:22   UUAGAGGAAGUUAGGGGAGGCC   1   =|||*||*|||||||||||||* targets:3173   GAUCCCCCUCAAUCCCCUCCGA   3194 Target Full Sequence	3.0	PREDICTED: Zea mays protein FAR1-RELATED SEQUENCE 6 (LOC103644317), transcript variant X1, mRNA	NA	coding protein	psRNATarget