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BaseInfo

ncRNA ID	novel_zma_miR5187
Species	Zea mays
Class	miRNA
Genome position	Chr10:91067935-91067999 [+]
Reference genome	RefGen_v4
Source	SRR2287164;SRR2287165
Length	24
Mature sequence(if miRNA)	1 - GGCACUCGGCAAAGCAGACUUUGU - 24
Stem-loop(if miRNA)	--   A             A          CG   GGC CUCGGCAAAGCAG CUUUGUUGAG  C   ||| ||||||||||||| ||||||||||  C   CUG GAGCCGUUUCGUC GAAACGGCUC  G AA   C             A          AC
Stem-loop sequence	GGCACUCGGCAAAGCAGACUUUGUUGAGCGCCGCACUCGGCAAAGACUGCUUUGCCGAGCGUCAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008654495.2	ncRNA:24   UGUUUCAGACGAAACGGCUCACGG   1   =|||||*||*|||||||||||||| targets:8   GCAAAGCCUUCUUUGCCGAGUGCC   31 Target Full Sequence	2.0	PREDICTED: Zea mays probable GMP synthase [glutamine-hydrolyzing] (LOC103632764), mRNA	NA	coding protein	psRNATarget
JB170493.1	ncRNA:24   UGUUUCAGACGAAACGGCUCACGG   1   =|||||***||||||||||||||| targets:3   GCAAAGAAGGCUUUGCCGAGUGCC   26 Target Full Sequence	3.0	Sequence 8157 from Patent EP2559767	NA	coding protein	psRNATarget
HI410032.1	ncRNA:24   UGUUUCAGACGAAACGGCUCACGG   1   =|||||***||||||||||||||| targets:3   GCAAAGAAGGCUUUGCCGAGUGCC   26 Target Full Sequence	3.0	Sequence 8157 from Patent EP2074227	NA	coding protein	psRNATarget
LQ242162.1	ncRNA:24   UGUUUCAGACGAAACGGCUCACGG   1   =|||||***||||||||||||||| targets:3   GCAAAGAAGGCUUUGCCGAGUGCC   26 Target Full Sequence	3.0	Sequence 8157 from Patent EP2985353	NA	coding protein	psRNATarget
EZ087925.1	ncRNA:24   UGUUUCAGACGAAACGGCUCACGG   1   =|||||***||||||||||||||| targets:86   GCAAAGAAAGCUUUGCCGAGUGCC   109 Target Full Sequence	3.0	TSA: Zea mays contig23571, mRNA sequence	NA	coding protein	psRNATarget
BT067215.1	ncRNA:24   UGUUUCAGACGAAACGGCUCACGG   1   =|||||***||||||||||||||| targets:1185   GCAAAGAAAGCUUUGCCGAGUGCC   1208 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFb0310H18 mRNA, complete cds	NA	coding protein	psRNATarget
BT064046.1	ncRNA:24   UGUUUCAGACGAAACGGCUCACGG   1   =|||||***||||||||||||||| targets:1322   GCAAAGAAAGCUUUGCCGAGUGCC   1345 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFc0133L10 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001175109.1	ncRNA:24   UGUUUCAGACGAAACGGCUCACGG   1   =|||||***||||||||||||||| targets:1322   GCAAAGAAAGCUUUGCCGAGUGCC   1345 Target Full Sequence	3.0	Zea mays 1-aminocyclopropane-1-carboxylate oxidase2 (cl955_1), mRNA	NA	coding protein	psRNATarget
JB170420.1	ncRNA:24   UGUUUCAGACGAAACGGCUCACGG   1   |*||||***||||||||||||||| targets:60   AAAAAGCAAGCUUUGCCGAGUGCC   83 Target Full Sequence	3.0	Sequence 8084 from Patent EP2559767	NA	coding protein	psRNATarget
LQ242089.1	ncRNA:24   UGUUUCAGACGAAACGGCUCACGG   1   |*||||***||||||||||||||| targets:60   AAAAAGCAAGCUUUGCCGAGUGCC   83 Target Full Sequence	3.0	Sequence 8084 from Patent EP2985353	NA	coding protein	psRNATarget
HI409959.1	ncRNA:24   UGUUUCAGACGAAACGGCUCACGG   1   |*||||***||||||||||||||| targets:60   AAAAAGCAAGCUUUGCCGAGUGCC   83 Target Full Sequence	3.0	Sequence 8084 from Patent EP2074227	NA	coding protein	psRNATarget