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BaseInfo

ncRNA ID	novel_zma_miR5183
Species	Zea mays
Class	miRNA
Genome position	Chr3:84161885-84161963 [+]
Reference genome	RefGen_v4
Source	SRR2287164
Length	23
Mature sequence(if miRNA)	57 - GGGCUUAUUUUCGGCGGCUUCUG - 79
Stem-loop(if miRNA)	--                    G   G               GAAGCCGCCGAAAAUAAGCC UUU CCGCCGAAAAUAG   |||||||||||||||||||| ||| ||||||||||||C   CUUCGGCGGCUUUUAUUCGG GAA GGCGGCUUUUAUU GU                    G   G
Stem-loop sequence	GAAGCCGCCGAAAAUAAGCCGUUUGCCGCCGAAAAUAGCUUAUUUUCGGCGGGAAGGGGCUUAUUUUCGGCGGCUUCUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
HI407204.1	ncRNA:23   GUCUUCGGCGGCUUUUAUUCGGG   1   ||*|||||||||||||||||*|| targets:4   CAAAAGCCGCCGAAAAUAAGGCC   26 Target Full Sequence	1.5	Sequence 5329 from Patent EP2074227	NA	coding protein	psRNATarget
LQ239334.1	ncRNA:23   GUCUUCGGCGGCUUUUAUUCGGG   1   ||*|||||||||||||||||*|| targets:4   CAAAAGCCGCCGAAAAUAAGGCC   26 Target Full Sequence	1.5	Sequence 5329 from Patent EP2985353	NA	coding protein	psRNATarget
JB167665.1	ncRNA:23   GUCUUCGGCGGCUUUUAUUCGGG   1   ||*|||||||||||||||||*|| targets:4   CAAAAGCCGCCGAAAAUAAGGCC   26 Target Full Sequence	1.5	Sequence 5329 from Patent EP2559767	NA	coding protein	psRNATarget
XM_008652299.2	ncRNA:23   GUCUUCGGCGGCUUUUAUUCGGG   1   ||*||*|||=||||||||||||= targets:1072   CAUAAUCCGUCGAAAAUAAGCCU   1094 Target Full Sequence	3.0	PREDICTED: Zea mays putative bZIP transcription factor superfamily protein (LOC103631376), mRNA	NA	coding protein	psRNATarget
XM_020541607.1	ncRNA:23   GUCUUCGGCGGCUUUUAUUCGGG   1   *||*|||||||||||||||*||= targets:718   GAGCAGCCGCCGAAAAUAAUCCU   740 Target Full Sequence	2.5	PREDICTED: Zea mays spidroin-1-like (LOC109941115), mRNA	NA	coding protein	psRNATarget
BT065567.1	ncRNA:23   GUCUUCGGCGGCUUUUAUUCGGG   1   ||**||||||||||||||||*|= targets:1029   CACCAGCCGCCGAAAAUAAGGCU   1051 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0298D06 mRNA, complete cds	NA	coding protein	psRNATarget
BT065567.1	ncRNA:23   GUCUUCGGCGGCUUUUAUUCGGG   1   ||**||||||||||||||||*|= targets:1070   CACCAGCCGCCGAAAAUAAGGCU   1092 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0298D06 mRNA, complete cds	NA	coding protein	psRNATarget