ncRNA ID | novel_zma_miR5182 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr7:43000015-43000115 [-] |
Reference genome | RefGen_v4 |
Source | SRR1618882 |
Length | 21 |
Mature sequence(if miRNA) | 81 - GGAGAUGAUCUUAUGUGAUGU - 101 |
Stem-loop(if miRNA) |
--   G      UU  G      GA   UG AU  A      UUGU        A   GGA AUGAUC  AU UGAUGU  UGA  G  AG UUAACU    UGGAUAUU G   ||| ||||||  || ||||||  |||  |  || ||||||    ||||||||   UCU UACUAG  UA AUUAUA  GUU  U  UC AAUUGA    AUUUAUAG A GG   G      --  G      -G   GU --  A      ----        U |
Stem-loop sequence | GGAGAUGAUCUUAUGUGAUGUGAUGAUGGAUAGAUUAACUUUGUUGGAUAUUAGAUGAUAUUUAAGUUAAACUUUGUUGGAUAUUAGAUGAUCAUGUCUGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ094897.1 |
|
1.5 | TSA: Zea mays contig30549, mRNA sequence | NA | coding protein | psRNATarget |