ncRNA ID | novel_zma_miR5181 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr3:44229387-44229603 [-] |
Reference genome | RefGen_v4 |
Source | SRR2287164 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GAACAACGAUUAAGGACCGGGCUG - 24 |
Stem-loop(if miRNA) |
--U               C        A       U              A  C                           UU                 -----A   GA    CCCGGUCCUUAAUCG UGUUCGGG CUCAGUU GGUCCAAACGGGUC UG UUGACAUAUGGACCUCACAUGUCAGCC  UGUAUCUCUUUUCUCUC      CCG  C    ||||||||||||||| |||||||| ||||||| |||||||||||||| || |||||||||||||||||||||||||||  |||||||||||||||||      |||    GGGCCAGGAAUUAGC ACAAGCCC GAGUCAA CCAGGUUUGCCUAG AC AACUGUAUACCUGGGGUGUACAGUCGG  ACAUAGAGAAAAGAGAG      GGU  A GUC               A        A       U              C  U                           CC                 AGAAAA   GU |
Stem-loop sequence | UCCCGGUCCUUAAUCGCUGUUCGGGACUCAGUUUGGUCCAAACGGGUCAUGCUUGACAUAUGGACCUCACAUGUCAGCCUUUGUAUCUCUUUUCUCUCACCGGACAUGUGGAAAAGAGAGAGAAAAGAGAUACACCGGCUGACAUGUGGGGUCCAUAUGUCAAUCACGAUCCGUUUGGACCUAACUGAGACCCGAACAACGAUUAAGGACCGGGCUG |