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BaseInfo

ncRNA ID	novel_zma_miR5180
Species	Zea mays
Class	miRNA
Genome position	Chr3:68911868-68911943 [-]
Reference genome	RefGen_v4
Source	SRR2287164;SRR4237227
Length	21
Mature sequence(if miRNA)	56 - AUCACGGGGGAUUGGAGGGGA - 76
Stem-loop(if miRNA)	--          A                       GA   AUCACGGGGG UUGGAGGGGAUUGAGGGGGAAAU  A   |||||||||| |||||||||||||||||||||||   UAGUGCUCCC AACCUCCCCUAACUCCCCCUUUA  C CC          C                       AU
Stem-loop sequence	AUCACGGGGGAUUGGAGGGGAUUGAGGGGGAAAUGAACUAAUUUCCCCCUCAAUCCCCUCCAACCCCUCGUGAUCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ235431.1	ncRNA:21   AGGGGAGGUUAGGGGGCACUA   1   ||||||||||||||||||||| targets:77   UCCCCUCCAAUCCCCCGUGAU   97 Target Full Sequence	0.0	Sequence 1426 from Patent EP2985353	NA	coding protein	psRNATarget
HI403301.1	ncRNA:21   AGGGGAGGUUAGGGGGCACUA   1   ||||||||||||||||||||| targets:77   UCCCCUCCAAUCCCCCGUGAU   97 Target Full Sequence	0.0	Sequence 1426 from Patent EP2074227	NA	coding protein	psRNATarget
JB163762.1	ncRNA:21   AGGGGAGGUUAGGGGGCACUA   1   ||||||||||||||||||||| targets:77   UCCCCUCCAAUCCCCCGUGAU   97 Target Full Sequence	0.0	Sequence 1426 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235420.1	ncRNA:21   AGGGGAGGUUAGGGGGCACUA   1   ||||||||||||||||||||| targets:80   UCCCCUCCAAUCCCCCGUGAU   100 Target Full Sequence	0.0	Sequence 1415 from Patent EP2985353	NA	coding protein	psRNATarget
JB163751.1	ncRNA:21   AGGGGAGGUUAGGGGGCACUA   1   ||||||||||||||||||||| targets:80   UCCCCUCCAAUCCCCCGUGAU   100 Target Full Sequence	0.0	Sequence 1415 from Patent EP2559767	NA	coding protein	psRNATarget
HI403290.1	ncRNA:21   AGGGGAGGUUAGGGGGCACUA   1   ||||||||||||||||||||| targets:80   UCCCCUCCAAUCCCCCGUGAU   100 Target Full Sequence	0.0	Sequence 1415 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235623.1	ncRNA:21   AGGGGAGGUUAGG-GGGCACUA   1   |||||||||||||-|||||||| targets:42   UCCCCUCCAAUCCUCCCGUGAU   63 Target Full Sequence	3.0	Sequence 1618 from Patent EP2985353	NA	coding protein	psRNATarget
HI403493.1	ncRNA:21   AGGGGAGGUUAGG-GGGCACUA   1   |||||||||||||-|||||||| targets:42   UCCCCUCCAAUCCUCCCGUGAU   63 Target Full Sequence	3.0	Sequence 1618 from Patent EP2074227	NA	coding protein	psRNATarget
JB163954.1	ncRNA:21   AGGGGAGGUUAGG-GGGCACUA   1   |||||||||||||-|||||||| targets:42   UCCCCUCCAAUCCUCCCGUGAU   63 Target Full Sequence	3.0	Sequence 1618 from Patent EP2559767	NA	coding protein	psRNATarget