Search result

BaseInfo

ncRNA ID novel_zma_miR5171
Species Zea mays
Class miRNA
Genome position Chr3:143821923-143821979 [-]
Reference genome RefGen_v4
Source SRR2287164;SRR1997866
Length 21
Mature sequence(if miRNA) 37 - UUAAGUUAAACUUUGUUGGAU - 57
Stem-loop(if miRNA) --     UU    UU   --     AUUAG
  UUAAG  AAAC  UGU  UGGAU     A
  |||||  ||||  |||  |||||     U
  GAUUU  UUUG  ACG  GCCUG     G
UA     -U    -U   UG     AACUA
Stem-loop sequence UUAAGUUAAACUUUGUUGGAUAUUAGAUGAUCAAGUCCGGUGCAUGUUUUUUUAGAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT054711.2
ncRNA:21   UAGGUUGUUUCAAAUUGAAUU   1
  ||||=|=||||||||||||||
targets:12   AUCCGAUAAAGUUUAACUUAA   32

2.0 Zea mays full-length cDNA clone ZM_BFb0106I11 mRNA, complete cds NA coding protein psRNATarget