ncRNA ID | novel_zma_miR5170 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr3:145076590-145076673 [-] |
Reference genome | RefGen_v4 |
Source | SRR2287164 |
Length | 22 |
Mature sequence(if miRNA) | 63 - ACACAAAGGACAAGAUGAAGGA - 84 |
Stem-loop(if miRNA) |
--A        AC    -   AG    U     CCACAAAUGG    CACAAAGG  AAGA UGA  GAUG GGUCU          A    ||||||||  |||| |||  |||| |||||          G    GUGUUUCU  UUCU ACU  UUAC CCUCG          A UUA        -A    U   CU    -     AGAUUUGAAA |
Stem-loop sequence | ACACAAAGGACAAGAUGAAGGAUGUGGUCUCCACAAAUGGAGAAAAGUUUAGAGCUCCCAUUUCUCAUUCUUAUCUUUGUGAUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008679900.2 |
|
2.5 | PREDICTED: Zea mays receptor protein kinase TMK1 (LOC103652907), mRNA | NA | coding protein | psRNATarget |