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BaseInfo

ncRNA ID	novel_zma_miR5169
Species	Zea mays
Class	miRNA
Genome position	Chr3:147792635-147792686 [-]
Reference genome	RefGen_v4
Source	SRR2287164;SRR2089702
Length	24
Mature sequence(if miRNA)	1 - UGCUCUCUGCACAGGGCCGGACGG - 24
Stem-loop(if miRNA)	--    GU     G    -   -    G   GUCC  GGCCU GUGC GAG GCGC G   ||||  ||||| |||| ||| ||||   CAGG  CCGGG CACG CUC CGUG C GG    --     A    U   U    G
Stem-loop sequence	GUCCGUGGCCUGGUGCGAGGCGCGGCGGUGCUCUCUGCACAGGGCCGGACGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ067064.1	ncRNA:24   GGCAGGCCGGGACACGUCUCUCGU   1   |||||||*||||||||||||=||| targets:37   CCGUCCGCCCCUGUGCAGAGGGCA   60 Target Full Sequence	2.5	TSA: Zea mays contig02698, mRNA sequence	NA	coding protein	psRNATarget
BT088349.1	ncRNA:24   GGCAGGCCGGGACACGUCUCUCGU   1   |||||||*||||||||||||=||| targets:1349   CCGUCCGCCCCUGUGCAGAGGGCA   1372 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0151F11 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001196968.1	ncRNA:24   GGCAGGCCGGGACACGUCUCUCGU   1   |||||||*||||||||||||=||| targets:1349   CCGUCCGCCCCUGUGCAGAGGGCA   1372 Target Full Sequence	2.5	Zea mays uncharacterized LOC100502490 (LOC100502490), mRNA	NA	coding protein	psRNATarget
EU948904.1	ncRNA:24   GGCAGGCCGGGACACGUCUCUCGU   1   |||||||*|||||||*|||||||| targets:529   CCGUCCGCCCCUGUGAAGAGAGCA   552 Target Full Sequence	2.5	Zea mays clone 389441 mRNA sequence	NA	coding protein	psRNATarget
EU949034.1	ncRNA:24   GGCAGGCCGGGACACGUCUCUCGU   1   |||||||*|||||||*|||||||| targets:530   CCGUCCGCCCCUGUGAAGAGAGCA   553 Target Full Sequence	2.5	Zea mays clone 394358 mRNA sequence	NA	coding protein	psRNATarget