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BaseInfo

ncRNA ID	novel_zma_miR5165
Species	Zea mays
Class	miRNA
Genome position	Chr3:25409746-25409795 [+]
Reference genome	RefGen_v4
Source	SRR2287164
Length	24
Mature sequence(if miRNA)	1 - AAACGGGGAUGGGGAUGGGGAAGC - 24
Stem-loop(if miRNA)	--AAA      -         GG A      CGGGGA UGGGGAUGG  A G      |||||| |||||||||  | C      GCCCCU GCCCCUACC  U A GGGGC      U         UU U
Stem-loop sequence	AAACGGGGAUGGGGAUGGGGAAGCAUUUUCCAUCCCCGUUCCCCGCGGGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020542351.1	ncRNA:24   CGAAGGGGUAGGGGUAGGGGCAAA   1   |||||||||||||||||||||||| targets:303   GCUUCCCCAUCCCCAUCCCCGUUU   326 Target Full Sequence	0.0	PREDICTED: Zea mays uncharacterized LOC103634680 (LOC103634680), transcript variant X5, mRNA	NA	coding protein	psRNATarget
NM_001196719.1	ncRNA:24   CGAAGGGGUAGGGGUAGGGGCAAA   1   ||*||||||||||||||*|||||* targets:921   GCGUCCCCAUCCCCAUCGCCGUUG   944 Target Full Sequence	2.5	Zea mays uncharacterized LOC100502242 (LOC100502242), mRNA	NA	coding protein	psRNATarget
BT087509.1	ncRNA:24   CGAAGGGGUAGGGGUAGGGGCAAA   1   ||*||||||||||||||*|||||* targets:921   GCGUCCCCAUCCCCAUCGCCGUUG   944 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0098P05 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001149497.2	ncRNA:24   CGAAGGGGUAGGGGUAGGGGCAAA   1   *|*|||||||||||||||||||** targets:602   CCCUCCCCAUCCCCAUCCCCGUGG   625 Target Full Sequence	2.5	Zea mays Protein ESKIMO 1 (umc2635), mRNA	NA	coding protein	psRNATarget
EU955856.1	ncRNA:24   CGAAGGGGUAGGGGUAGGGGCAAA   1   *|*|||||||||||||||||||** targets:603   CCCUCCCCAUCCCCAUCCCCGUGG   626 Target Full Sequence	2.5	Zea mays clone 1549233 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget