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BaseInfo

ncRNA ID novel_zma_miR5162
Species Zea mays
Class miRNA
Genome position Chr3:229277647-229277736 [+]
Reference genome RefGen_v4
Source SRR2287164
Length 24
Mature sequence(if miRNA) 67 - AAAAAGAAACGGAGGGAGUAAUGA - 90
Stem-loop(if miRNA) --UG                                        A
    UACUCCCUCCGUUUCUUUUUAUUAGUCGCUGGAUAGUGCA A
    ||||||||||||||||||||||||||||||||||||||||
    AUGAGGGAGGCAAAGAAAAAUAAUCAGCGACCUAUCACGU A
AGUA                                        U
Stem-loop sequence UGUACUCCCUCCGUUUCUUUUUAUUAGUCGCUGGAUAGUGCAAAAUUGCACUAUCCAGCGACUAAUAAAAAGAAACGGAGGGAGUAAUGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020537567.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  |=||||||||||||||||||||||
targets:1448   UUAUUACUCCCUCCGUUUCUUUUU   1471

0.0 PREDICTED: Zea mays MADS2 (zmm2), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020546613.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  *=||||||||||||||||||||||
targets:3694   CUAUUACUCCCUCCGUUUCUUUUU   3717

0.0 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020546612.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  *=||||||||||||||||||||||
targets:2915   CUAUUACUCCCUCCGUUUCUUUUU   2938

0.0 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020546614.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  *=||||||||||||||||||||||
targets:2809   CUAUUACUCCCUCCGUUUCUUUUU   2832

0.0 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X3, mRNA NA coding protein psRNATarget
XM_020546615.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  *=||||||||||||||||||||||
targets:2792   CUAUUACUCCCUCCGUUUCUUUUU   2815

0.0 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X4, mRNA NA coding protein psRNATarget
XM_008671992.2
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  *=||||||||||||||||||||||
targets:1268   AUAUUACUCCCUCCGUUUCUUUUU   1291

0.0 PREDICTED: Zea mays uncharacterized LOC103647454 (LOC103647454), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008671993.2
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  *=||||||||||||||||||||||
targets:1162   AUAUUACUCCCUCCGUUUCUUUUU   1185

0.0 PREDICTED: Zea mays uncharacterized LOC103647454 (LOC103647454), transcript variant X2, mRNA NA coding protein psRNATarget
JB163862.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  *=||||||||||||||||||||||
targets:7   GUAUUACUCCCUCCGUUUCUUUUU   30

0.0 Sequence 1526 from Patent EP2559767 NA coding protein psRNATarget
HI403401.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  *=||||||||||||||||||||||
targets:7   GUAUUACUCCCUCCGUUUCUUUUU   30

0.0 Sequence 1526 from Patent EP2074227 NA coding protein psRNATarget
LQ235531.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  *=||||||||||||||||||||||
targets:7   GUAUUACUCCCUCCGUUUCUUUUU   30

0.0 Sequence 1526 from Patent EP2985353 NA coding protein psRNATarget
XM_020546693.1
ncRNA:24   AGUA-AUGAGGGAGGCAAAGAAAAA   1
  |=||-||||||||||||||||||||
targets:2138   UUAUAUACUCCCUCCGUUUCUUUUU   2162

0.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X11, mRNA NA coding protein psRNATarget
XM_020546692.1
ncRNA:24   AGUA-AUGAGGGAGGCAAAGAAAAA   1
  |=||-||||||||||||||||||||
targets:2200   UUAUAUACUCCCUCCGUUUCUUUUU   2224

0.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X10, mRNA NA coding protein psRNATarget
XM_020546684.1
ncRNA:24   AGUA-AUGAGGGAGGCAAAGAAAAA   1
  |=||-||||||||||||||||||||
targets:2239   UUAUAUACUCCCUCCGUUUCUUUUU   2263

0.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020546683.1
ncRNA:24   AGUA-AUGAGGGAGGCAAAGAAAAA   1
  |=||-||||||||||||||||||||
targets:2214   UUAUAUACUCCCUCCGUUUCUUUUU   2238

0.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020546689.1
ncRNA:24   AGUA-AUGAGGGAGGCAAAGAAAAA   1
  |=||-||||||||||||||||||||
targets:2159   UUAUAUACUCCCUCCGUUUCUUUUU   2183

0.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X7, mRNA NA coding protein psRNATarget
XM_020546691.1
ncRNA:24   AGUA-AUGAGGGAGGCAAAGAAAAA   1
  |=||-||||||||||||||||||||
targets:2200   UUAUAUACUCCCUCCGUUUCUUUUU   2224

0.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X9, mRNA NA coding protein psRNATarget
XM_020546686.1
ncRNA:24   AGUA-AUGAGGGAGGCAAAGAAAAA   1
  |=||-||||||||||||||||||||
targets:2221   UUAUAUACUCCCUCCGUUUCUUUUU   2245

0.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X4, mRNA NA coding protein psRNATarget
XM_020546687.1
ncRNA:24   AGUA-AUGAGGGAGGCAAAGAAAAA   1
  |=||-||||||||||||||||||||
targets:2221   UUAUAUACUCCCUCCGUUUCUUUUU   2245

0.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X5, mRNA NA coding protein psRNATarget
XM_020546685.1
ncRNA:24   AGUA-AUGAGGGAGGCAAAGAAAAA   1
  |=||-||||||||||||||||||||
targets:2221   UUAUAUACUCCCUCCGUUUCUUUUU   2245

0.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X3, mRNA NA coding protein psRNATarget
XM_020546694.1
ncRNA:24   AGUA-AUGAGGGAGGCAAAGAAAAA   1
  |=||-||||||||||||||||||||
targets:2200   UUAUAUACUCCCUCCGUUUCUUUUU   2224

0.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X12, mRNA NA coding protein psRNATarget
XM_008666445.2
ncRNA:24   AGUA-AUGAGGGAGGCAAAGAAAAA   1
  |=||-||||||||||||||||||||
targets:2200   UUAUAUACUCCCUCCGUUUCUUUUU   2224

0.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X14, mRNA NA coding protein psRNATarget
XM_020546695.1
ncRNA:24   AGUA-AUGAGGGAGGCAAAGAAAAA   1
  |=||-||||||||||||||||||||
targets:2200   UUAUAUACUCCCUCCGUUUCUUUUU   2224

0.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X13, mRNA NA coding protein psRNATarget
JB169079.1
ncRNA:23   GUAAUGAGGGAGGCAAAGAAAAA   1
  *||||||||||||||||||||||
targets:1   AAUUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 6743 from Patent EP2559767 NA coding protein psRNATarget
LQ240748.1
ncRNA:23   GUAAUGAGGGAGGCAAAGAAAAA   1
  *||||||||||||||||||||||
targets:1   AAUUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 6743 from Patent EP2985353 NA coding protein psRNATarget
HI408618.1
ncRNA:23   GUAAUGAGGGAGGCAAAGAAAAA   1
  *||||||||||||||||||||||
targets:1   AAUUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 6743 from Patent EP2074227 NA coding protein psRNATarget
BT060817.2
ncRNA:24   AGUA-----AUGAGGGAGGCAAAGAAAAA   1
  ||||-----||||||||||||||||||||
targets:221   UCAUACCAAUACUCCCUCCGUUUCUUUUU   249

0.0 Zea mays full-length cDNA clone ZM_BFb0054B23 mRNA, complete cds NA coding protein psRNATarget
LQ241829.1
ncRNA:23   GUAAUGAGGGAGGCAAAGAAAAA   1
  ==|||||||||||||||||||||
targets:1   UGUUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 7824 from Patent EP2985353 NA coding protein psRNATarget
HI409699.1
ncRNA:23   GUAAUGAGGGAGGCAAAGAAAAA   1
  ==|||||||||||||||||||||
targets:1   UGUUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 7824 from Patent EP2074227 NA coding protein psRNATarget
JB170160.1
ncRNA:23   GUAAUGAGGGAGGCAAAGAAAAA   1
  ==|||||||||||||||||||||
targets:1   UGUUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 7824 from Patent EP2559767 NA coding protein psRNATarget
XM_008674191.2
ncRNA:24   AGUA------AUGAGGGAGGCAAAGAAAAA   1
  ||||------||||||||||||||||||||
targets:1141   UCAUGUUGGAUACUCCCUCCGUUUCUUUUU   1170

0.0 PREDICTED: Zea mays putative protein S-acyltransferase 16 (LOC100273154), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008647346.2
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  |=|*||||||||||||||||||||
targets:137   UUAAUACUCCCUCCGUUUCUUUUU   160

0.0 PREDICTED: Zea mays E3 ubiquitin-protein ligase Os03g0188200 (LOC103626988), mRNA NA coding protein psRNATarget
JB163860.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  ||||-|||||||||||||||||||
targets:8   UCAU-ACUCCCUCCGUUUCUUUUU   30

0.0 Sequence 1524 from Patent EP2559767 NA coding protein psRNATarget
LQ235409.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  |=|*||||||||||||||||||||
targets:7   UUAGUACUCCCUCCGUUUCUUUUU   30

0.0 Sequence 1404 from Patent EP2985353 NA coding protein psRNATarget
JB163740.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  |=|*||||||||||||||||||||
targets:7   UUAGUACUCCCUCCGUUUCUUUUU   30

0.0 Sequence 1404 from Patent EP2559767 NA coding protein psRNATarget
HI403279.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  |=|*||||||||||||||||||||
targets:7   UUAGUACUCCCUCCGUUUCUUUUU   30

0.0 Sequence 1404 from Patent EP2074227 NA coding protein psRNATarget
LQ235529.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  ||||-|||||||||||||||||||
targets:8   UCAU-ACUCCCUCCGUUUCUUUUU   30

0.0 Sequence 1524 from Patent EP2985353 NA coding protein psRNATarget
HI403399.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  ||||-|||||||||||||||||||
targets:8   UCAU-ACUCCCUCCGUUUCUUUUU   30

0.0 Sequence 1524 from Patent EP2074227 NA coding protein psRNATarget
HI405860.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  |*|||||||=||||||||||||||
targets:1   UAAUUACUCUCUCCGUUUCUUUUU   24

1.0 Sequence 3985 from Patent EP2074227 NA coding protein psRNATarget
JB166321.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  |*|||||||=||||||||||||||
targets:1   UAAUUACUCUCUCCGUUUCUUUUU   24

1.0 Sequence 3985 from Patent EP2559767 NA coding protein psRNATarget
LQ237990.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  |*|||||||=||||||||||||||
targets:1   UAAUUACUCUCUCCGUUUCUUUUU   24

1.0 Sequence 3985 from Patent EP2985353 NA coding protein psRNATarget
EU953599.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  *||*||||||||||||||||||||
targets:1221   CCACUACUCCCUCCGUUUCUUUUU   1244

0.0 Zea mays clone 1437867 F-box domain containing protein mRNA, complete cds NA coding protein psRNATarget
XM_020546173.1
ncRNA:24   AGUA-AUGAGGGAGGCAAAGAAAAA   1
  *=||-||||||||||||||||||||
targets:1458   AUAUAUACUCCCUCCGUUUCUUUUU   1482

0.0 PREDICTED: Zea mays myb-related protein P-like (LOC109943268), mRNA NA coding protein psRNATarget
XM_008651543.2
ncRNA:24   AGUA-AUGAGGGAGGCAAAGAAAAA   1
  *|||-||||=|||||||||||||||
targets:2491   ACAUAUACUUCCUCCGUUUCUUUUU   2515

1.0 PREDICTED: Zea mays uncharacterized LOC103630492 (LOC103630492), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008669400.2
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  |=||-|||||||||||||||||||
targets:1597   UUAU-ACUCCCUCCGUUUCUUUUU   1619

0.0 PREDICTED: Zea mays Pentatricopeptide repeat-containing protein PNM1 mitochondrial (LOC100274849), transcript variant X1, mRNA NA coding protein psRNATarget
EU970288.1
ncRNA:24   AGUA-AUGAGGGAGGCAAAGAAAAA   1
  *|||-||||||||=|||||||||||
targets:1326   GCAUGUACUCCCUUCGUUUCUUUUU   1350

1.5 Zea mays clone 343094 metal tolerance protein C3 mRNA, complete cds NA coding protein psRNATarget
XM_008651544.2
ncRNA:24   AGUA-AUGAGGGAGGCAAAGAAAAA   1
  *|||-||||=|||||||||||||||
targets:1350   ACAUAUACUUCCUCCGUUUCUUUUU   1374

1.0 PREDICTED: Zea mays uncharacterized LOC103630492 (LOC103630492), transcript variant X2, mRNA NA coding protein psRNATarget
EZ061772.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  |=||-|||||||||||||||||||
targets:181   UUAU-ACUCCCUCCGUUUCUUUUU   203

0.0 TSA: Zea mays contig62894, mRNA sequence NA coding protein psRNATarget
LQ235499.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  |=||-|||||||||||||||||||
targets:8   UUAU-ACUCCCUCCGUUUCUUUUU   30

0.0 Sequence 1494 from Patent EP2985353 NA coding protein psRNATarget
JB163830.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  |=||-|||||||||||||||||||
targets:8   UUAU-ACUCCCUCCGUUUCUUUUU   30

0.0 Sequence 1494 from Patent EP2559767 NA coding protein psRNATarget
LQ235486.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  ||=|-|||||||||||||||||||
targets:8   UCGU-ACUCCCUCCGUUUCUUUUU   30

0.0 Sequence 1481 from Patent EP2985353 NA coding protein psRNATarget
HI403369.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  |=||-|||||||||||||||||||
targets:8   UUAU-ACUCCCUCCGUUUCUUUUU   30

0.0 Sequence 1494 from Patent EP2074227 NA coding protein psRNATarget
JB163817.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  ||=|-|||||||||||||||||||
targets:8   UCGU-ACUCCCUCCGUUUCUUUUU   30

0.0 Sequence 1481 from Patent EP2559767 NA coding protein psRNATarget
HI403356.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  ||=|-|||||||||||||||||||
targets:8   UCGU-ACUCCCUCCGUUUCUUUUU   30

0.0 Sequence 1481 from Patent EP2074227 NA coding protein psRNATarget
HI409599.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  ||||-||||=||||||||||||||
targets:1   UCAU-ACUCUCUCCGUUUCUUUUU   23

1.0 Sequence 7724 from Patent EP2074227 NA coding protein psRNATarget
LQ241729.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  ||||-||||=||||||||||||||
targets:1   UCAU-ACUCUCUCCGUUUCUUUUU   23

1.0 Sequence 7724 from Patent EP2985353 NA coding protein psRNATarget
JB170060.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  ||||-||||=||||||||||||||
targets:1   UCAU-ACUCUCUCCGUUUCUUUUU   23

1.0 Sequence 7724 from Patent EP2559767 NA coding protein psRNATarget
XM_008658752.2
ncRNA:24   AGUA--AUGAGGGAGGCAAAGAAAAA   1
  *=||--||||||||||||||||||||
targets:2038   AUAUACUACUCCCUCCGUUUCUUUUU   2063

0.0 PREDICTED: Zea mays protein NRT1/ PTR FAMILY 8.1 (LOC103636396), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020542418.1
ncRNA:24   AGUA--AUGAGGGAGGCAAAGAAAAA   1
  *=||--||||||||||||||||||||
targets:1971   AUAUACUACUCCCUCCGUUUCUUUUU   1996

0.0 PREDICTED: Zea mays protein NRT1/ PTR FAMILY 8.1 (LOC103636396), transcript variant X3, mRNA NA coding protein psRNATarget
BT024153.1
ncRNA:24   AGUA-AUGAGGGAGGCAAAGAAAAA   1
  |||*-||||||||||||||||||||
targets:185   UCACGUACUCCCUCCGUUUCUUUUU   209

0.0 Zea mays clone EL01N0438E01 mRNA sequence NA coding protein psRNATarget
NM_001156655.1
ncRNA:24   AG-UAAUGAGGGAGGCAAAGAAAAA   1
  ||-|*||||||||||||||||||||
targets:1283   UCUAAUACUCCCUCCGUUUCUUUUU   1307

0.0 Zea mays wax synthase (LOC100283756), mRNA NA coding protein psRNATarget
EU965844.1
ncRNA:24   AG-UAAUGAGGGAGGCAAAGAAAAA   1
  ||-|*||||||||||||||||||||
targets:1283   UCUAAUACUCCCUCCGUUUCUUUUU   1307

0.0 Zea mays clone 289333 wax synthase isoform 3 mRNA, complete cds NA coding protein psRNATarget
BT017382.1
ncRNA:24   AGUA-AUGAGGGAGGCAAAGAAAAA   1
  ||||-||||||||||||||||*|||
targets:690   UCAUAUACUCCCUCCGUUUCUCUUU   714

1.5 Zea mays clone EL01N0326E08.c mRNA sequence NA coding protein psRNATarget
EU973473.1
ncRNA:24   AGUA-------AUGAGGGAGGCAAAGAAAAA   1
  |=||-------||||||||||||||||||||
targets:638   UUAUAAACUUGUACUCCCUCCGUUUCUUUUU   668

0.0 Zea mays clone 399411 mRNA sequence NA coding protein psRNATarget
XM_020544250.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  *|||-|||||||||||||||||||
targets:2432   ACAU-ACUCCCUCCGUUUCUUUUU   2454

0.0 PREDICTED: Zea mays G-type lectin S-receptor-like serine/threonine-protein kinase B120 (LOC103638818), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020553339.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  *=|*||||||||||||||||||||
targets:2138   CUACUACUCCCUCCGUUUCUUUUU   2161

0.0 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X5, mRNA NA coding protein psRNATarget
XM_020553327.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  *=|*||||||||||||||||||||
targets:2107   CUACUACUCCCUCCGUUUCUUUUU   2130

0.0 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020553342.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  *=|*||||||||||||||||||||
targets:2025   CUACUACUCCCUCCGUUUCUUUUU   2048

0.0 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X7, mRNA NA coding protein psRNATarget
XM_020553332.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  *=|*||||||||||||||||||||
targets:1994   CUACUACUCCCUCCGUUUCUUUUU   2017

0.0 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X4, mRNA NA coding protein psRNATarget
XM_008677073.2
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  *=|*||||||||||||||||||||
targets:1523   CUACUACUCCCUCCGUUUCUUUUU   1546

0.0 PREDICTED: Zea mays probable glycosyltransferase At5g03795 (LOC103651446), mRNA NA coding protein psRNATarget
XM_008682282.2
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  *=|*||||||||||||||||||||
targets:1405   CUACUACUCCCUCCGUUUCUUUUU   1428

0.0 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X3, mRNA NA coding protein psRNATarget
EU973763.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  *=|*||||||||||||||||||||
targets:1299   CUACUACUCCCUCCGUUUCUUUUU   1322

0.0 Zea mays clone 409560 F-box domain containing protein mRNA, complete cds NA coding protein psRNATarget
NM_001158647.2
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  *=|*||||||||||||||||||||
targets:1297   CUACUACUCCCUCCGUUUCUUUUU   1320

0.0 Zea mays F-box domain containing protein (LOC100285757), mRNA NA coding protein psRNATarget
XM_008682289.2
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  *=|*||||||||||||||||||||
targets:1245   CUACUACUCCCUCCGUUUCUUUUU   1268

0.0 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X6, mRNA NA coding protein psRNATarget
EU973774.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  *=|*||||||||||||||||||||
targets:1231   CUACUACUCCCUCCGUUUCUUUUU   1254

0.0 Zea mays clone 410704 F-box domain containing protein mRNA, complete cds NA coding protein psRNATarget
XM_008682276.2
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  *=|*||||||||||||||||||||
targets:1216   CUACUACUCCCUCCGUUUCUUUUU   1239

0.0 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X2, mRNA NA coding protein psRNATarget
XM_008655254.2
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  ||-||||||||||||||||||||*
targets:1046   UC-UUACUCCCUCCGUUUCUUUUA   1068

1.0 PREDICTED: Zea mays acid phosphatase 1 (LOC103633566), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020541157.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  ||-||||||||||||||||||||*
targets:1027   UC-UUACUCCCUCCGUUUCUUUUA   1049

1.0 PREDICTED: Zea mays acid phosphatase 1 (LOC103633566), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020541158.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  ||-||||||||||||||||||||*
targets:1025   UC-UUACUCCCUCCGUUUCUUUUA   1047

1.0 PREDICTED: Zea mays acid phosphatase 1 (LOC103633566), transcript variant X3, mRNA NA coding protein psRNATarget
BT062074.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  *=|*||||||||||||||||||||
targets:1133   CUACUACUCCCUCCGUUUCUUUUU   1156

0.0 Zea mays full-length cDNA clone ZM_BFb0212O02 mRNA, complete cds NA coding protein psRNATarget
NM_001152046.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  *=||||||===|||||||||||||
targets:824   AUAUUACUUUUUCCGUUUCUUUUU   847

3.0 Zea mays uncharacterized LOC100278927 (LOC100278927), mRNA NA coding protein psRNATarget
EU976025.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  *=||||||===|||||||||||||
targets:824   AUAUUACUUUUUCCGUUUCUUUUU   847

3.0 Zea mays clone 508899 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
JB163755.1
ncRNA:24   AGUA------AUGAGGGAGGCAAAGAAAAA   1
  *|||------||||||||||||||||||||
targets:1   ACAUGAGAACUACUCCCUCCGUUUCUUUUU   30

0.0 Sequence 1419 from Patent EP2559767 NA coding protein psRNATarget
HI403294.1
ncRNA:24   AGUA------AUGAGGGAGGCAAAGAAAAA   1
  *|||------||||||||||||||||||||
targets:1   ACAUGAGAACUACUCCCUCCGUUUCUUUUU   30

0.0 Sequence 1419 from Patent EP2074227 NA coding protein psRNATarget
LQ235424.1
ncRNA:24   AGUA------AUGAGGGAGGCAAAGAAAAA   1
  *|||------||||||||||||||||||||
targets:1   ACAUGAGAACUACUCCCUCCGUUUCUUUUU   30

0.0 Sequence 1419 from Patent EP2985353 NA coding protein psRNATarget
HI410196.1
ncRNA:22   UA-AUGAGGGAGGCAAAGAAAAA   1
  ||-||||||||||||||||||||
targets:1   AUGUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 8321 from Patent EP2074227 NA coding protein psRNATarget
LQ242326.1
ncRNA:22   UA-AUGAGGGAGGCAAAGAAAAA   1
  ||-||||||||||||||||||||
targets:1   AUGUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 8321 from Patent EP2985353 NA coding protein psRNATarget
JB170657.1
ncRNA:22   UA-AUGAGGGAGGCAAAGAAAAA   1
  ||-||||||||||||||||||||
targets:1   AUGUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 8321 from Patent EP2559767 NA coding protein psRNATarget
LQ241458.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  *|||-|||||||||||||||||||
targets:1   CCAU-ACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 7453 from Patent EP2985353 NA coding protein psRNATarget
HI408710.1
ncRNA:22   UA-AUGAGGGAGGCAAAGAAAAA   1
  ||-||||||||||||||||||||
targets:1   AUGUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 6835 from Patent EP2074227 NA coding protein psRNATarget
JB169031.1
ncRNA:23   GUAAUGAGGGAGGCAAAGAAAAA   1
  =|*||||||||||||||||||||
targets:1   UACUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 6695 from Patent EP2559767 NA coding protein psRNATarget
LQ240700.1
ncRNA:23   GUAAUGAGGGAGGCAAAGAAAAA   1
  =|*||||||||||||||||||||
targets:1   UACUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 6695 from Patent EP2985353 NA coding protein psRNATarget
LQ240840.1
ncRNA:22   UA-AUGAGGGAGGCAAAGAAAAA   1
  ||-||||||||||||||||||||
targets:1   AUGUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 6835 from Patent EP2985353 NA coding protein psRNATarget
HI409328.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  *|||-|||||||||||||||||||
targets:1   CCAU-ACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 7453 from Patent EP2074227 NA coding protein psRNATarget
JB169171.1
ncRNA:22   UA-AUGAGGGAGGCAAAGAAAAA   1
  ||-||||||||||||||||||||
targets:1   AUGUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 6835 from Patent EP2559767 NA coding protein psRNATarget
JB169789.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  *|||-|||||||||||||||||||
targets:1   CCAU-ACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 7453 from Patent EP2559767 NA coding protein psRNATarget
HI408570.1
ncRNA:23   GUAAUGAGGGAGGCAAAGAAAAA   1
  =|*||||||||||||||||||||
targets:1   UACUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 6695 from Patent EP2074227 NA coding protein psRNATarget
BT067066.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  **=||||||||||||||||||||*
targets:415   AAGUUACUCCCUCCGUUUCUUUUA   438

1.0 Zea mays full-length cDNA clone ZM_BFb0180L06 mRNA, complete cds NA coding protein psRNATarget
HI403287.1
ncRNA:24   AGUA--AUGAGGGAGGCAAAGAAAAA   1
  **||--||||||||||||||||||||
targets:5   AAAUGAUACUCCCUCCGUUUCUUUUU   30

0.0 Sequence 1412 from Patent EP2074227 NA coding protein psRNATarget
JB163748.1
ncRNA:24   AGUA--AUGAGGGAGGCAAAGAAAAA   1
  **||--||||||||||||||||||||
targets:5   AAAUGAUACUCCCUCCGUUUCUUUUU   30

0.0 Sequence 1412 from Patent EP2559767 NA coding protein psRNATarget
LQ235417.1
ncRNA:24   AGUA--AUGAGGGAGGCAAAGAAAAA   1
  **||--||||||||||||||||||||
targets:5   AAAUGAUACUCCCUCCGUUUCUUUUU   30

0.0 Sequence 1412 from Patent EP2985353 NA coding protein psRNATarget
LQ239400.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  |==|-|||||||||||||||||||
targets:3   UUGU-ACUCCCUCCGUUUCUUUUU   25

0.0 Sequence 5395 from Patent EP2985353 NA coding protein psRNATarget
JB167731.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  |==|-|||||||||||||||||||
targets:3   UUGU-ACUCCCUCCGUUUCUUUUU   25

0.0 Sequence 5395 from Patent EP2559767 NA coding protein psRNATarget
HI407270.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  |==|-|||||||||||||||||||
targets:3   UUGU-ACUCCCUCCGUUUCUUUUU   25

0.0 Sequence 5395 from Patent EP2074227 NA coding protein psRNATarget
XM_008664460.2
ncRNA:24   AGUA--AUGAGGGAGGCAAAGAAAAA   1
  *=||--|||||||||=||||||||||
targets:107   AUAUAGUACUCCCUCUGUUUCUUUUU   132

1.5 PREDICTED: Zea mays hypothetical protein (LOC103641061), transcript variant X1, mRNA NA coding protein psRNATarget
EU957018.1
ncRNA:24   AGUA-AUGAGGGAGGCAAAGAAAAA   1
  |*||-|||||||||=||||||||||
targets:1995   UAAUAUACUCCCUCUGUUUCUUUUU   2019

1.5 Zea mays clone 1580670 cytochrome P450 CYP84A33v2 mRNA, complete cds NA coding protein psRNATarget
XM_008656936.2
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  **|*||||||||||||||||||||
targets:160   AAAGUACUCCCUCCGUUUCUUUUU   183

0.0 PREDICTED: Zea mays putative HLH DNA-binding domain superfamily protein (LOC100381500), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008664463.2
ncRNA:24   AGUA--AUGAGGGAGGCAAAGAAAAA   1
  *=||--|||||||||=||||||||||
targets:87   AUAUAGUACUCCCUCUGUUUCUUUUU   112

1.5 PREDICTED: Zea mays hypothetical protein (LOC103641061), transcript variant X3, mRNA NA coding protein psRNATarget
EZ058532.1
ncRNA:24   AGUA--AUGAGGGAGGCAAAGAAAAA   1
  *|=|--|||||||||=||||||||||
targets:264   ACGUGCUACUCCCUCUGUUUCUUUUU   289

1.5 TSA: Zea mays contig59654, mRNA sequence NA coding protein psRNATarget
LQ240753.1
ncRNA:24   AGUAAUGAGGGAGG-CAAAGAAAAA   1
  |=|*||||||||||-||||||||||
targets:4   UUAGUACUCCCUCCAGUUUCUUUUU   28

3.0 Sequence 6748 from Patent EP2985353 NA coding protein psRNATarget
JB169084.1
ncRNA:24   AGUAAUGAGGGAGG-CAAAGAAAAA   1
  |=|*||||||||||-||||||||||
targets:4   UUAGUACUCCCUCCAGUUUCUUUUU   28

3.0 Sequence 6748 from Patent EP2559767 NA coding protein psRNATarget
HI408623.1
ncRNA:24   AGUAAUGAGGGAGG-CAAAGAAAAA   1
  |=|*||||||||||-||||||||||
targets:4   UUAGUACUCCCUCCAGUUUCUUUUU   28

3.0 Sequence 6748 from Patent EP2074227 NA coding protein psRNATarget
HI409961.1
ncRNA:23   GUAAUGAGGGAGGCAAAGAAAAA   1
  *|*||||||||||||||||||||
targets:1   AAGUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 8086 from Patent EP2074227 NA coding protein psRNATarget
LQ241746.1
ncRNA:23   GUAAUGAGGGAGGCAAAGAAAAA   1
  *|*||||||||||||||||||||
targets:1   AACUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 7741 from Patent EP2985353 NA coding protein psRNATarget
LQ241075.1
ncRNA:23   GUAAUGAGGGAGGCAAAGAAAAA   1
  *|*||||||||||||||||||||
targets:1   AAGUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 7070 from Patent EP2985353 NA coding protein psRNATarget
JB170077.1
ncRNA:23   GUAAUGAGGGAGGCAAAGAAAAA   1
  *|*||||||||||||||||||||
targets:1   AACUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 7741 from Patent EP2559767 NA coding protein psRNATarget
HI409616.1
ncRNA:23   GUAAUGAGGGAGGCAAAGAAAAA   1
  *|*||||||||||||||||||||
targets:1   AACUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 7741 from Patent EP2074227 NA coding protein psRNATarget
HI408945.1
ncRNA:23   GUAAUGAGGGAGGCAAAGAAAAA   1
  *|*||||||||||||||||||||
targets:1   AAGUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 7070 from Patent EP2074227 NA coding protein psRNATarget
JB170422.1
ncRNA:23   GUAAUGAGGGAGGCAAAGAAAAA   1
  *|*||||||||||||||||||||
targets:1   AAGUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 8086 from Patent EP2559767 NA coding protein psRNATarget
LQ242091.1
ncRNA:23   GUAAUGAGGGAGGCAAAGAAAAA   1
  *|*||||||||||||||||||||
targets:1   AAGUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 8086 from Patent EP2985353 NA coding protein psRNATarget
JB169406.1
ncRNA:23   GUAAUGAGGGAGGCAAAGAAAAA   1
  *|*||||||||||||||||||||
targets:1   AAGUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 7070 from Patent EP2559767 NA coding protein psRNATarget
JB170076.1
ncRNA:23   GUAAUGAGGGAGGCAAAGAAAAA   1
  *|*||||||||||||||||||||
targets:1   AACUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 7740 from Patent EP2559767 NA coding protein psRNATarget
LQ241745.1
ncRNA:23   GUAAUGAGGGAGGCAAAGAAAAA   1
  *|*||||||||||||||||||||
targets:1   AACUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 7740 from Patent EP2985353 NA coding protein psRNATarget
HI409615.1
ncRNA:23   GUAAUGAGGGAGGCAAAGAAAAA   1
  *|*||||||||||||||||||||
targets:1   AACUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 7740 from Patent EP2074227 NA coding protein psRNATarget
NM_001352327.1
ncRNA:24   AGUA--AUGAGGGAGGCAAAGAAAAA   1
  |==|--||||||=||=||||||||||
targets:2663   UUGUAGUACUCCUUCUGUUUCUUUUU   2688

2.5 Zea mays delta-1-pyrroline-5-carboxylate synthase-like (LOC103630430), mRNA NA coding protein psRNATarget
XM_008677351.2
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  **=*||||||||||||||||||||
targets:2053   AAGGUACUCCCUCCGUUUCUUUUU   2076

0.0 PREDICTED: Zea mays hypothetical protein (LOC103651662), mRNA NA coding protein psRNATarget
XM_008675770.2
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  *==||||||*||||||||||||||
targets:1804   AUGUUACUCACUCCGUUUCUUUUU   1827

1.0 PREDICTED: Zea mays pectinesterase-like (LOC103650113), mRNA NA coding protein psRNATarget
NM_001148943.2
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  **=*||||||||||||||||||||
targets:1539   AAGAUACUCCCUCCGUUUCUUUUU   1562

0.0 Zea mays uncharacterized LOC100274590 (LOC100274590), mRNA NA coding protein psRNATarget
EZ112557.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  **=*||||||||||||||||||||
targets:44   GAGGUACUCCCUCCGUUUCUUUUU   67

0.0 TSA: Zea mays contig48218, mRNA sequence NA coding protein psRNATarget
HI410015.1
ncRNA:22   UA-AUGAGGGAGGCAAAGAAAAA   1
  ||-|||||||||=||||||||||
targets:1   AUGUACUCCCUCUGUUUCUUUUU   23

1.5 Sequence 8140 from Patent EP2074227 NA coding protein psRNATarget
JB170476.1
ncRNA:22   UA-AUGAGGGAGGCAAAGAAAAA   1
  ||-|||||||||=||||||||||
targets:1   AUGUACUCCCUCUGUUUCUUUUU   23

1.5 Sequence 8140 from Patent EP2559767 NA coding protein psRNATarget
LQ242145.1
ncRNA:22   UA-AUGAGGGAGGCAAAGAAAAA   1
  ||-|||||||||=||||||||||
targets:1   AUGUACUCCCUCUGUUUCUUUUU   23

1.5 Sequence 8140 from Patent EP2985353 NA coding protein psRNATarget
XM_008656166.2
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  |*|*|||||||||=||||||||||
targets:1262   UGAAUACUCCCUCUGUUUCUUUUU   1285

1.5 PREDICTED: Zea mays uncharacterized LOC100193630 (LOC100193630), transcript variant X1, mRNA NA coding protein psRNATarget
BT035950.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  |*|*|||||||||=||||||||||
targets:1398   UGAAUACUCCCUCUGUUUCUUUUU   1421

1.5 Zea mays full-length cDNA clone ZM_BFb0089G20 mRNA, complete cds NA coding protein psRNATarget
NM_001138729.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  |*|*|||||||||=||||||||||
targets:1398   UGAAUACUCCCUCUGUUUCUUUUU   1421

1.5 Zea mays uncharacterized LOC100193630 (LOC100193630), mRNA NA coding protein psRNATarget
XM_008656167.2
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  |*|*|||||||||=||||||||||
targets:1217   UGAAUACUCCCUCUGUUUCUUUUU   1240

1.5 PREDICTED: Zea mays uncharacterized LOC100193630 (LOC100193630), transcript variant X2, mRNA NA coding protein psRNATarget
EU964554.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  |*||||||=||||||||||*||||
targets:1323   UGAUUACUUCCUCCGUUUCGUUUU   1346

2.5 Zea mays clone 279840 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
BT088158.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  |*|*|||||||||=||||||||||
targets:1198   UGAAUACUCCCUCUGUUUCUUUUU   1221

1.5 Zea mays full-length cDNA clone ZM_BFc0038O11 mRNA, complete cds NA coding protein psRNATarget
EU945792.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  |*||||||=||||||||||*||||
targets:1174   UGAUUACUUCCUCCGUUUCGUUUU   1197

2.5 Zea mays clone 285684 mRNA sequence NA coding protein psRNATarget
EU973028.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  |*|*|||||||||=||||||||||
targets:1164   UGAAUACUCCCUCUGUUUCUUUUU   1187

1.5 Zea mays clone 391970 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
EU956063.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  |*|*|||||||||=||||||||||
targets:1058   UGAAUACUCCCUCUGUUUCUUUUU   1081

1.5 Zea mays clone 1556707 mRNA sequence NA coding protein psRNATarget
BT068381.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  |*|*|||||||||=||||||||||
targets:1105   UGAAUACUCCCUCUGUUUCUUUUU   1128

1.5 Zea mays full-length cDNA clone ZM_BFb0135M15 mRNA, complete cds NA coding protein psRNATarget
LQ235397.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  |*|*||=|||||||||||||||||
targets:96   UAAAUAUUCCCUCCGUUUCUUUUU   119

1.0 Sequence 1392 from Patent EP2985353 NA coding protein psRNATarget
JB163728.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  |*|*||=|||||||||||||||||
targets:96   UAAAUAUUCCCUCCGUUUCUUUUU   119

1.0 Sequence 1392 from Patent EP2559767 NA coding protein psRNATarget
HI403267.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  |*|*||=|||||||||||||||||
targets:96   UAAAUAUUCCCUCCGUUUCUUUUU   119

1.0 Sequence 1392 from Patent EP2074227 NA coding protein psRNATarget
HI407324.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  |=|*|||||||||||||||*||||
targets:2   UUAAUACUCCCUCCGUUUCGUUUU   25

1.5 Sequence 5449 from Patent EP2074227 NA coding protein psRNATarget
LQ239454.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  |=|*|||||||||||||||*||||
targets:2   UUAAUACUCCCUCCGUUUCGUUUU   25

1.5 Sequence 5449 from Patent EP2985353 NA coding protein psRNATarget
JB167785.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  |=|*|||||||||||||||*||||
targets:2   UUAAUACUCCCUCCGUUUCGUUUU   25

1.5 Sequence 5449 from Patent EP2559767 NA coding protein psRNATarget
EU964879.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  **|*||||||||||||||=|||||
targets:843   AAAGUACUCCCUCCGUUUUUUUUU   866

1.5 Zea mays clone 282287 ribulose-phosphate 3-epimerase mRNA, complete cds NA coding protein psRNATarget
NM_001156378.2
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  **|*||||||||||||||=|||||
targets:842   AAAGUACUCCCUCCGUUUUUUUUU   865

1.5 Zea mays ribulose-phosphate 3-epimerase (LOC100283478), mRNA NA coding protein psRNATarget
BT065536.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  **|*||||||||||||||=|||||
targets:784   AAAGUACUCCCUCCGUUUUUUUUU   807

1.5 Zea mays full-length cDNA clone ZM_BFb0224G04 mRNA, complete cds NA coding protein psRNATarget
NM_001156357.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  *||*|||||||||||||||*||||
targets:1511   CCAAUACUCCCUCCGUUUCGUUUU   1534

1.5 Zea mays Acetylornithine deacetylase (pco121857a), mRNA NA coding protein psRNATarget
EU964807.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  *||*|||||||||||||||*||||
targets:1511   CCAAUACUCCCUCCGUUUCGUUUU   1534

1.5 Zea mays clone 281665 acetylornithine deacetylase mRNA, complete cds NA coding protein psRNATarget
NM_001328133.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  |***||||||||||||||=|||||
targets:760   UACGUACUCCCUCCGUUUUUUUUU   783

1.5 Zea mays Methionyl-tRNA synthetase (LOC100384454), mRNA NA coding protein psRNATarget
BT070166.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  |***||||||||||||||=|||||
targets:760   UACGUACUCCCUCCGUUUUUUUUU   783

1.5 Zea mays full-length cDNA clone ZM_BFc0141C23 mRNA, complete cds NA coding protein psRNATarget
BT062468.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  *||*|||||||||||||||*||||
targets:567   CCAAUACUCCCUCCGUUUCGUUUU   590

1.5 Zea mays full-length cDNA clone ZM_BFb0302A02 mRNA, complete cds NA coding protein psRNATarget
LQ240984.1
ncRNA:20   AUGAGGGAGGCAAAGAAAAA   1
  |||||=||||||||||||||
targets:1   UACUCUCUCCGUUUCUUUUU   20

1.0 Sequence 6979 from Patent EP2985353 NA coding protein psRNATarget
JB169315.1
ncRNA:20   AUGAGGGAGGCAAAGAAAAA   1
  |||||=||||||||||||||
targets:1   UACUCUCUCCGUUUCUUUUU   20

1.0 Sequence 6979 from Patent EP2559767 NA coding protein psRNATarget
HI408854.1
ncRNA:20   AUGAGGGAGGCAAAGAAAAA   1
  |||||=||||||||||||||
targets:1   UACUCUCUCCGUUUCUUUUU   20

1.0 Sequence 6979 from Patent EP2074227 NA coding protein psRNATarget
LQ241224.1
ncRNA:20   AUGAGGGAGGCAAAGAAAAA   1
  |||||||||=||||||||||
targets:1   UACUCCCUCUGUUUCUUUUU   20

1.5 Sequence 7219 from Patent EP2985353 NA coding protein psRNATarget
HI409094.1
ncRNA:20   AUGAGGGAGGCAAAGAAAAA   1
  |||||||||=||||||||||
targets:1   UACUCCCUCUGUUUCUUUUU   20

1.5 Sequence 7219 from Patent EP2074227 NA coding protein psRNATarget
JB169555.1
ncRNA:20   AUGAGGGAGGCAAAGAAAAA   1
  |||||||||=||||||||||
targets:1   UACUCCCUCUGUUUCUUUUU   20

1.5 Sequence 7219 from Patent EP2559767 NA coding protein psRNATarget
XM_020547478.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  |=||-|||||*|||||||||||||
targets:3178   UUAU-ACUCCAUCCGUUUCUUUUU   3200

1.0 PREDICTED: Zea mays Putative pentatricopeptide repeat-containing protein (LOC100216998), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020547479.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  |=||-|||||*|||||||||||||
targets:3178   UUAU-ACUCCAUCCGUUUCUUUUU   3200

1.0 PREDICTED: Zea mays Putative pentatricopeptide repeat-containing protein (LOC100216998), transcript variant X2, mRNA NA coding protein psRNATarget
XM_008669138.2
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  |=||-|||||*|||||||||||||
targets:2800   UUAU-ACUCCAUCCGUUUCUUUUU   2822

1.0 PREDICTED: Zea mays Putative pentatricopeptide repeat-containing protein (LOC100216998), transcript variant X3, mRNA NA coding protein psRNATarget
XM_008669142.2
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  |=||-|||||*|||||||||||||
targets:2668   UUAU-ACUCCAUCCGUUUCUUUUU   2690

1.0 PREDICTED: Zea mays Putative pentatricopeptide repeat-containing protein (LOC100216998), transcript variant X8, mRNA NA coding protein psRNATarget
XM_008669143.2
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  |=||-|||||*|||||||||||||
targets:2738   UUAU-ACUCCAUCCGUUUCUUUUU   2760

1.0 PREDICTED: Zea mays Putative pentatricopeptide repeat-containing protein (LOC100216998), transcript variant X7, mRNA NA coding protein psRNATarget
EU971439.1
ncRNA:24   AGU-AAUGAGGGAGGCAAAGAAAAA   1
  *||-||||||=|||||||||*||||
targets:2108   ACACUUACUCUCUCCGUUUCGUUUU   2132

2.5 Zea mays clone 364738 cyclin-like F-box mRNA, complete cds NA coding protein psRNATarget
NM_001158152.1
ncRNA:24   AGU-AAUGAGGGAGGCAAAGAAAAA   1
  *||-||||||=|||||||||*||||
targets:2108   ACACUUACUCUCUCCGUUUCGUUUU   2132

2.5 Zea mays cyclin-like F-box (LOC100285258), mRNA NA coding protein psRNATarget
EU971616.1
ncRNA:24   AGUAAUGAGGGAGGCAAAGAAAAA   1
  |==*|||||||||||||||*||||
targets:1158   UUGGUACUCCCUCCGUUUCGUUUU   1181

1.5 Zea mays clone 368130 rieske domain containing protein mRNA, complete cds NA coding protein psRNATarget
BT035546.1
ncRNA:24   AGUA-AUGAGGGAGGCAAAGAAAAA   1
  *=||-|||||||||||||||*||||
targets:907   AUAUAUACUCCCUCCGUUUCGUUUU   931

1.5 Zea mays full-length cDNA clone ZM_BFb0068P01 mRNA, complete cds NA coding protein psRNATarget
EU968044.1
ncRNA:24   AGUA-AUGAGGGAGGCAAAGAAAAA   1
  *=||-|||||||||||||||*||||
targets:1019   AUAUAUACUCCCUCCGUUUCGUUUU   1043

1.5 Zea mays clone 313382 adenylyl-sulfate kinase 1 mRNA, complete cds NA coding protein psRNATarget
JB167766.1
ncRNA:24   AGUA-AUGAGGGAGGCAAAGAAAAA   1
  *=||-|||||||||||||||*||||
targets:1   AUAUAUACUCCCUCCGUUUCGUUUU   25

1.5 Sequence 5430 from Patent EP2559767 NA coding protein psRNATarget
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