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BaseInfo

ncRNA ID	novel_zma_miR5152
Species	Zea mays
Class	miRNA
Genome position	Chr2:45202268-45202338 [-]
Reference genome	RefGen_v4
Source	SRR2287164;SRR2287165;SRR2089702;SRR2089703;SRR2089705
Length	24
Mature sequence(if miRNA)	48 - ACGGGUAUGGGUUUGGGACGGCAA - 71
Stem-loop(if miRNA)	--             U    C    AAACCCA      U   ACGGGUAUGGGUU GGGA GGCA       GCGGGU U   ||||||||||||| |||| ||||       ||||||   UGUCCGUACCUAA CUCU CCGU       UGCCCA G CC             U    A    -------      U
Stem-loop sequence	ACGGGUAUGGGUUUGGGACGGCAAAACCCAGCGGGUUUGUACCCGUUGCCAUCUCUAAUCCAUGCCUGUCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB166433.1	ncRNA:24   AACGGCAGGGUUUGGGUAUGGGCA   1   ||||||||||||||||=||||||| targets:6   UUGCCGUCCCAAACCCGUACCCGU   29 Target Full Sequence	1.5	Sequence 4097 from Patent EP2559767	NA	coding protein	psRNATarget
HI405972.1	ncRNA:24   AACGGCAGGGUUUGGGUAUGGGCA   1   ||||||||||||||||=||||||| targets:6   UUGCCGUCCCAAACCCGUACCCGU   29 Target Full Sequence	1.5	Sequence 4097 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238102.1	ncRNA:24   AACGGCAGGGUUUGGGUAUGGGCA   1   ||||||||||||||||=||||||| targets:6   UUGCCGUCCCAAACCCGUACCCGU   29 Target Full Sequence	1.5	Sequence 4097 from Patent EP2985353	NA	coding protein	psRNATarget
XM_008667280.2	ncRNA:24   AACGGCAGGGUUUGGGUAUGGGCA   1   ||||||||||||||||=||||||| targets:1070   UUGCCGUCCCAAACCCGUACCCGU   1093 Target Full Sequence	1.5	PREDICTED: Zea mays hypothetical protein (LOC100276571), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008667278.2	ncRNA:24   AACGGCAGGGUUUGGGUAUGGGCA   1   ||||||||||||||||=||||||| targets:1074   UUGCCGUCCCAAACCCGUACCCGU   1097 Target Full Sequence	1.5	PREDICTED: Zea mays hypothetical protein (LOC100276571), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020549356.1	ncRNA:24   AACGGCAGGGUUUGGGUAUGGGCA   1   ||||||||||||||||=||||||| targets:1590   UUGCCGUCCCAAACCCGUACCCGU   1613 Target Full Sequence	1.5	PREDICTED: Zea mays UDP-glycosyltransferase 90A1 (LOC103649130), mRNA	NA	coding protein	psRNATarget
BT042623.2	ncRNA:24   AACGGCAGGGUUUGGGUAUGGGCA   1   |||==*||||||||||=||||||| targets:285   UUGUUAUCCCAAACCCGUACCCGU   308 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0377K06 mRNA, complete cds	NA	coding protein	psRNATarget