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BaseInfo

ncRNA ID novel_zma_miR5151
Species Zea mays
Class miRNA
Genome position Chr2:104198401-104198451 [-]
Reference genome RefGen_v4
Source SRR2287164
Length 24
Mature sequence(if miRNA) 1 - GGGCACUCGGCAAAGAAAAGUAGC - 24
Stem-loop(if miRNA) ---AGCC             A   UU
       UUUUUUGUCGAGU CUU  U
       ||||||||||||| |||
       AAGAAACGGCUCA GGG  C
CGAUGAA             C   CU
Stem-loop sequence AGCCUUUUUUGUCGAGUACUUUUUCUCGGGCACUCGGCAAAGAAAAGUAGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008654495.2
ncRNA:24   CGAUGAAAAGAAACGGCUCACGGG   1
  ***|***|||||||||||||||||
targets:9   CAAAGCCUUCUUUGCCGAGUGCCC   32

2.0 PREDICTED: Zea mays probable GMP synthase [glutamine-hydrolyzing] (LOC103632764), mRNA NA coding protein psRNATarget