ncRNA ID | novel_zma_miR5149 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr2:149834160-149834216 [-] |
Reference genome | RefGen_v4 |
Source | SRR2287164;SRR2287165;SRR1997865;SRR5451003;SRR5451004;SRR5451005;SRR5451006 |
Length | 24 |
Mature sequence(if miRNA) | 34 - GCUCGACGAACUGUACAUCGGCAG - 57 |
Stem-loop(if miRNA) |
--          CU    A       C A   GCUCGACGAA  GUAC UCGGCAG G U   ||||||||||  |||| ||||||| |   CGGGCUGUUU  CAUG AGCCGUU C C CA          UU    -       U U |
Stem-loop sequence | GCUCGACGAACUGUACAUCGGCAGCGAUCUCUUUGCCGAGUACUUUUUGUCGGGCAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008677261.2 |
|
2.5 | PREDICTED: Zea mays uncharacterized LOC103651598 (LOC103651598), transcript variant X2, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_008677260.2 |
|
2.5 | PREDICTED: Zea mays uncharacterized LOC103651598 (LOC103651598), transcript variant X1, mRNA | NA | coding protein | psRNATarget |