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BaseInfo

ncRNA ID novel_zma_miR5143
Species Zea mays
Class miRNA
Genome position Chr2:206363975-206364036 [-]
Reference genome RefGen_v4
Source SRR2287164
Length 24
Mature sequence(if miRNA) 39 - UUCCUAGAGACGGCCGUAGGAAGU - 62
Stem-loop(if miRNA) --                            A
  UUCCUAGAGACGGCCGUAGGAAGUUAGC U
  ||||||||||||||||||||||||||||
  AAGGAUCUCUGCCGGCAUCCUUCAAUCG G
UG                            A
Stem-loop sequence UUCCUAGAGACGGCCGUAGGAAGUUAGCAUGAGCUAACUUCCUACGGCCGUCUCUAGGAAGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT087567.2
ncRNA:24   UGAAGGAUGCCGGCAGAGAUCCUU   1
  =||--|*|||||||||||*|||||
targets:281   GCU--CGACGGCCGUCUCGAGGAA   302

2.5 Zea mays full-length cDNA clone ZM_BFb0115D10 mRNA, complete cds NA coding protein psRNATarget