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BaseInfo

ncRNA ID novel_zma_miR5134
Species Zea mays
Class miRNA
Genome position Chr6:17394612-17394672 [+]
Reference genome RefGen_v4
Source SRR1618882
Length 22
Mature sequence(if miRNA) 40 - AUGGGAGACUUCGCUCGGCGGA - 61
Stem-loop(if miRNA) -- -  AG          UU CG  G    G
  C CC  GCGAAGUCUU  G  CC CGAA U
  | ||  ||||||||||  |  || ||||
  G GG  CGCUUCAGAG  U  GG GUUU G
AG C  CU          GG AA  A    U
Stem-loop sequence CCCAGGCGAAGUCUUUUGCGCCGCGAAGUGUUUUGAGGAAUGGGAGACUUCGCUCGGCGGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU940885.1
ncRNA:22   AGGCGGCUCGCUUCAGAGGGUA   1
  ||||||||||||||||||||*|
targets:1214   UCCGCCGAGCGAAGUCUCCCCU   1235

1.5 Zea mays clone 1166220 mRNA sequence NA coding protein psRNATarget