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BaseInfo

ncRNA ID novel_zma_miR5130
Species Zea mays
Class miRNA
Genome position Chr1:89984861-89984929 [+]
Reference genome RefGen_v4
Source SRR2287164
Length 24
Mature sequence(if miRNA) 46 - CCGGUGAUUUUUAGUGGAGUGGCU - 69
Stem-loop(if miRNA) -- UG         --C                  
  U  CUCCAUUGG   UCACCGGACUGUCCGGUGG
  |  |||||||||   ||||||||||||||||||C
  G  GAGGUGAUU   AGUGGCCUGACAGGCCACA
UC GU         UUU                  
Stem-loop sequence UUGCUCCAUUGGCUCACCGGACUGUCCGGUGGCACACCGGACAGUCCGGUGAUUUUUAGUGGAGUGGCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT016818.1
ncRNA:24   UCGGUGAGGUGAUUUUUAGUGGCC   1
  *|=|-|||||||||||||*|||||
targets:451   UGUC-CUCCACUAAAAAUGACCGG   473

1.5 Zea mays clone Contig651 mRNA sequence NA coding protein psRNATarget