Search result

BaseInfo

ncRNA ID	novel_zma_miR5125
Species	Zea mays
Class	miRNA
Genome position	Chr1:5816957-5817006 [-]
Reference genome	RefGen_v4
Source	SRR2287164;SRR2287165
Length	21
Mature sequence(if miRNA)	1 - UUGCAGCCGGACUGCAACAAA - 21
Stem-loop(if miRNA)	--        C            UA   UGUUGCAG CCGGCUGCAAAU  G   |||||||| ||||||||||||   ACAACGUC GGCCGACGUUUG  G AA        A            UC
Stem-loop sequence	UGUUGCAGCCCGGCUGCAAAUUAGGCUGUUUGCAGCCGGACUGCAACAAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020547144.1	ncRNA:21   AAACAACGUCAGGCCGACGUU   1   ||||*|||||*|||||||||| targets:116   UUUGCUGCAGCCCGGCUGCAA   136 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103636662 (LOC103636662), mRNA	NA	coding protein	psRNATarget
XM_008657979.2	ncRNA:21   AAACAACGUCAGGCCGACGUU   1   *|||*|||||||||*|||||| targets:1371   AUUGCUGCAGUCCGACUGCAA   1391 Target Full Sequence	2.5	PREDICTED: Zea mays annexin-like protein RJ4 (LOC103635552), mRNA	NA	coding protein	psRNATarget
XM_008653247.2	ncRNA:19   ACAACGUCAGGCCGACGUU   1   ||*|||||*|||||||||| targets:1   UGCUGCAGCCCGGCUGCAA   19 Target Full Sequence	2.5	PREDICTED: Zea mays 50S ribosomal protein L18 (LOC103631773), mRNA	NA	coding protein	psRNATarget