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BaseInfo

ncRNA ID novel_zma_miR5123
Species Zea mays
Class miRNA
Genome position Chr1:29531079-29531158 [-]
Reference genome RefGen_v4
Source SRR2287164
Length 24
Mature sequence(if miRNA) 57 - GCCGACUGAGGUACGCGUGUCAGG - 80
Stem-loop(if miRNA) --G        -G   -       -  -----G   AAGGUGUC
   CCGACUGA  GUA CGCGUGU CA      GAU        A
   ||||||||  ||| ||||||| ||      |||
   GGUUGGCU  CAU GCGUACG GU      CGC        G
GAG        GG   A       U  AAAUUA   CCCUAGCG
Stem-loop sequence GCCGACUGAGGUACGCGUGUCAGGAUAAGGUGUCAGGCGAUCCCCGCAUUAAAUGUGCAUGCGAUACGGUCGGUUGGGAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI409923.1
ncRNA:24   GGACUGUGCGCAUGGAGUCAGCCG   1
  ||||||||||||=|||||||||||
targets:8   CCUGACACGCGUGCCUCAGUCGGC   31

1.5 Sequence 8048 from Patent EP2074227 NA coding protein psRNATarget
JB170384.1
ncRNA:24   GGACUGUGCGCAUGGAGUCAGCCG   1
  ||||||||||||=|||||||||||
targets:8   CCUGACACGCGUGCCUCAGUCGGC   31

1.5 Sequence 8048 from Patent EP2559767 NA coding protein psRNATarget
LQ242053.1
ncRNA:24   GGACUGUGCGCAUGGAGUCAGCCG   1
  ||||||||||||=|||||||||||
targets:8   CCUGACACGCGUGCCUCAGUCGGC   31

1.5 Sequence 8048 from Patent EP2985353 NA coding protein psRNATarget