Search result

BaseInfo

ncRNA ID	novel_zma_miR5115
Species	Zea mays
Class	miRNA
Genome position	Chr1:212212484-212212641 [-]
Reference genome	RefGen_v4
Source	SRR2287164
Length	21
Mature sequence(if miRNA)	1 - AUACAGUGGUAGAGUAGGCAA - 21
Stem-loop(if miRNA)	--             G        U   G       A                            --        C   G   GCCUACUCUACUA UGUAUAAA UUU AAGUUCA AUUCAUCAUAUGUUAAGAGAUACAAAAA  AGAGAAUU UGA G   ||||||||||||| |||||||| ||| ||||||| ||||||||||||||||||||||||||||  |||||||| |||   CGGAUGAGAUGGU ACAUAUUU AAA UUCAAGU UAAGUAGUAUACAAUUCUCUAUGUUUUU  UCUUUUAA ACU U AA             G        U   G       C                            UA        A   C
Stem-loop sequence	GCCUACUCUACUAGUGUAUAAAUUUUGAAGUUCAAAUUCAUCAUAUGUUAAGAGAUACAAAAAAGAGAAUUCUGAGGUCUCAAAAUUUUCUAUUUUUUGUAUCUCUUAACAUAUGAUGAAUCUGAACUUGAAAUUUUAUACAGUGGUAGAGUAGGCAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008657758.2	ncRNA:21   AACGGAUGAGAUGGUGACAUA   1   |*||||||*|||||||||||* targets:42   UAGCCUACGCUACCACUGUAG   62 Target Full Sequence	2.5	PREDICTED: Zea mays methylesterase 7 (LOC103635265), mRNA	NA	coding protein	psRNATarget