ncRNA ID | novel_zma_miR5114 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr10:120678826-120678998 [-] |
Reference genome | RefGen_v4 |
Source | SRR2287164 |
Length | 21 |
Mature sequence(if miRNA) | 1 - AUACAGUGGUAGAGUAGGCAA - 21 |
Stem-loop(if miRNA) |
--U  -          CA          A  A        C       A    A     CAA                 A   AUUUU    CC ACUCUACCAC  UAUAAAAUUU AA UUCAAAUU AUCAUAU UUAA AGAUA   AAAGGAGAAAAUUCUGA AUA     C    || ||||||||||  |||||||||| || |||||||| ||||||| |||| |||||   ||||||||||||||||| |||     A    GG UGAGAUGGUG  AUAUUUUAAA UU AAGUUUAA UAGUAUA AAUU UCUAU   UUUUCUCUUUUAAGACU UAU     C AAC  A          AC          G  C        A       C    C     ---                 C   GUUUU |
Stem-loop sequence | UCCACUCUACCACCAUAUAAAAUUUAAAAUUCAAAUUCAUCAUAUAUUAAAAGAUACAAAAAGGAGAAAAUUCUGAAAUAAUUUUCACUUUUGUAUCUCAGAAUUUUCUCUUUUUAUCUCUUAACAUAUGAUAAAUUUGAACUUGAAAUUUUAUACAGUGGUAGAGUAGGCAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008657758.2 |
|
2.5 | PREDICTED: Zea mays methylesterase 7 (LOC103635265), mRNA | NA | coding protein | psRNATarget |