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BaseInfo

ncRNA ID novel_zma_miR5111
Species Zea mays
Class miRNA
Genome position Chr6:100869500-100869591 [-]
Reference genome RefGen_v4
Source SRR1618882;SRR4237220;SRR4237221;SRR5105963
Length 24
Mature sequence(if miRNA) 69 - ACGAGAUGGACUGACCUAUGGGGG - 92
Stem-loop(if miRNA) --         A     C              UA     AGCCCUCU
  ACGAGAUGG CUGAC UAUGGGGGACGAAU  CCUUG        C
  ||||||||| ||||| ||||||||||||||  |||||        A
  UGCUCUACC GACUG AUACCCCCUGUUUA  GGAGC        G
UA         C     -              --     ACAUACCC
Stem-loop sequence ACGAGAUGGACUGACCUAUGGGGGACGAAUUACCUUGAGCCCUCUCAGCCCAUACACGAGGAUUUGUCCCCCAUAGUCAGCCCAUCUCGUAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020539261.1
ncRNA:24   GGGGGUAUCCAGUCAGGUAGAGCA   1
  ||||=||||*||||||||||||||
targets:373   CCCCUAUAGAUCAGUCCAUCUCGU   396

1.0 PREDICTED: Zea mays uncharacterized LOC103629447 (LOC103629447), mRNA NA coding protein psRNATarget