ncRNA ID | novel_zma_miR5107 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr6:103350784-103350919 [-] |
Reference genome | RefGen_v4 |
Source | SRR1618882;SRR5105961;SRR5105963 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UUGGGGUAUAACCGAACAUGGCCU - 24 |
Stem-loop(if miRNA) |
--   -           - UU                 AG        UAUGGAUUG A        UGA   A   GCU UGUUCGGUUAU U  CAAUUCAUAUGGAUUGA  GGGAUUGA         G GGGGAUUU   CUU G   ||| ||||||||||| |  |||||||||||||||||  ||||||||         | ||||||||   |||   CGG ACAAGCCAAUA G  GUUAGGUAUACCUAACU  CCCUAACU         C CCCCUAAG   GGG U UC   U           U GG                 CA        --------- -        UUA   A |
Stem-loop sequence | GCUUGUUCGGUUAUUUUCAAUUCAUAUGGAUUGAAGGGGAUUGAUAUGGAUUGGAGGGGAUUUUGACUUAGUAGGGAUUGAAUCCCCCUCAAUCCCACUCAAUCCAUAUGGAUUGGGGUAUAACCGAACAUGGCCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008677073.2 |
|
2.5 | PREDICTED: Zea mays probable glycosyltransferase At5g03795 (LOC103651446), mRNA | NA | coding protein | psRNATarget |