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BaseInfo

ncRNA ID novel_zma_miR5103
Species Zea mays
Class miRNA
Genome position Chr1:271085445-271085619 [+]
Reference genome RefGen_v4
Source SRR2287164
Length 21
Mature sequence(if miRNA) 155 - AUACAGUGGUAGAGUAGGCAA - 175
Stem-loop(if miRNA) --                                             G                 -        A       CAAAAA
  GUCUACUCUAUUACUGUAUAAAAUUUUAAGUUCAAAUUCAUUAUA GUUAAGAGAUACAAAAA AGAAAACU UGAGAUA      A
  ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||
  CGGAUGAGAUGGUGACAUAUUUUAAAGUUCAAGUUUAAGUAGUAU CAAUUCUCUAUGUUUUU UCUUUUGA ACUCUAU      U
AA                                             A                 A        G       UAAAAA
Stem-loop sequence GUCUACUCUAUUACUGUAUAAAAUUUUAAGUUCAAAUUCAUUAUAGGUUAAGAGAUACAAAAAAGAAAACUAUGAGAUACAAAAAAUAAAAAUUAUCUCAGAGUUUUCUAUUUUUGUAUCUCUUAACAUAUGAUGAAUUUGAACUUGAAAUUUUAUACAGUGGUAGAGUAGGCAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008657758.2
ncRNA:21   AACGGAUGAGAUGGUGACAUA   1
  |*||||||*|||||||||||*
targets:42   UAGCCUACGCUACCACUGUAG   62

2.5 PREDICTED: Zea mays methylesterase 7 (LOC103635265), mRNA NA coding protein psRNATarget