ncRNA ID | novel_zma_miR5103 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:271085445-271085619 [+] |
Reference genome | RefGen_v4 |
Source | SRR2287164 |
Length | 21 |
Mature sequence(if miRNA) | 155 - AUACAGUGGUAGAGUAGGCAA - 175 |
Stem-loop(if miRNA) |
--                                             G                 -        A       CAAAAA   GUCUACUCUAUUACUGUAUAAAAUUUUAAGUUCAAAUUCAUUAUA GUUAAGAGAUACAAAAA AGAAAACU UGAGAUA      A   ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||   CGGAUGAGAUGGUGACAUAUUUUAAAGUUCAAGUUUAAGUAGUAU CAAUUCUCUAUGUUUUU UCUUUUGA ACUCUAU      U AA                                             A                 A        G       UAAAAA |
Stem-loop sequence | GUCUACUCUAUUACUGUAUAAAAUUUUAAGUUCAAAUUCAUUAUAGGUUAAGAGAUACAAAAAAGAAAACUAUGAGAUACAAAAAAUAAAAAUUAUCUCAGAGUUUUCUAUUUUUGUAUCUCUUAACAUAUGAUGAAUUUGAACUUGAAAUUUUAUACAGUGGUAGAGUAGGCAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008657758.2 |
|
2.5 | PREDICTED: Zea mays methylesterase 7 (LOC103635265), mRNA | NA | coding protein | psRNATarget |