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BaseInfo

ncRNA ID novel_zma_miR5102
Species Zea mays
Class miRNA
Genome position Chr9:150661710-150661766 [-]
Reference genome RefGen_v4
Source SRR2287164
Length 24
Mature sequence(if miRNA) 34 - CGACGGGUAAACGGGGAUAGGGAU - 57
Stem-loop(if miRNA) --  A    UA         A    -  GG
  CG CGGG  AACGGGGAU GGGA UG  A
  || ||||  ||||||||| |||| ||
  GC GCCC  UUGCCCCUA CCCU AC  A
GG  -    -C         C    U  GA
Stem-loop sequence CGACGGGUAAACGGGGAUAGGGAUGGGAAAGCAUUCCCCAUCCCCGUUCCCCGCGGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020542351.1
ncRNA:24   UAGGGAUAGGGGCAAAUGGGCAGC   1
  |||||*||||||||||||||||||
targets:311   AUCCCCAUCCCCGUUUACCCGUCG   334

1.0 PREDICTED: Zea mays uncharacterized LOC103634680 (LOC103634680), transcript variant X5, mRNA NA coding protein psRNATarget