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BaseInfo

ncRNA ID novel_zma_miR5101
Species Zea mays
Class miRNA
Genome position Chr6:111307450-111307647 [-]
Reference genome RefGen_v4
Source SRR1618882
Length 23
Mature sequence(if miRNA) 176 - AAUUUUUAUGUAGAUCCUCUAUU - 198
Stem-loop(if miRNA) --        UG      C   A          A  C     --CCAU     U              U            CCCAUAA    C     UAUUU
  AAUUUUUA  UAGAUC UCU UUAGAUAAAC AA AUACA      UUUUU GAAUUUUCUGAGAA UUUGAAUUUGGA       UUUA AUAAA     U
  ||||||||  |||||| ||| |||||||||| || |||||      ||||| |||||||||||||| ||||||||||||       |||| |||||     A
  UUAAAAAU  GUCUAG AGA AAUCUAUUUG UU UAUGU      AAAGA CUUAAAAGAUUCUU AAACUUAGAUCU       AGAU UAUUU     G
GG        GU      A   G          A  C     AUUUAU     U              U            -------    A     CAAGA
Stem-loop sequence AAUUUUUAUGUAGAUCCUCUAUUAGAUAAACAAACAUACACCAUUUUUUUGAAUUUUCUGAGAAUUUUGAAUUUGGACCCAUAAUUUACAUAAAUAUUUUAGAGAACUUUAUAUAGAUCUAGAUUCAAAUUUCUUAGAAAAUUCUAGAAAUAUUUAUGUAUCUUAGUUUAUCUAAGAGAAGAUCUGUGUAAAAAUUGG