ncRNA ID | novel_zma_miR5101 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr6:111307450-111307647 [-] |
Reference genome | RefGen_v4 |
Source | SRR1618882 |
Length | 23 |
Mature sequence(if miRNA) | 176 - AAUUUUUAUGUAGAUCCUCUAUU - 198 |
Stem-loop(if miRNA) |
--        UG      C   A          A  C     --CCAU     U              U            CCCAUAA    C     UAUUU   AAUUUUUA  UAGAUC UCU UUAGAUAAAC AA AUACA      UUUUU GAAUUUUCUGAGAA UUUGAAUUUGGA       UUUA AUAAA     U   ||||||||  |||||| ||| |||||||||| || |||||      ||||| |||||||||||||| ||||||||||||       |||| |||||     A   UUAAAAAU  GUCUAG AGA AAUCUAUUUG UU UAUGU      AAAGA CUUAAAAGAUUCUU AAACUUAGAUCU       AGAU UAUUU     G GG        GU      A   G          A  C     AUUUAU     U              U            -------    A     CAAGA |
Stem-loop sequence | AAUUUUUAUGUAGAUCCUCUAUUAGAUAAACAAACAUACACCAUUUUUUUGAAUUUUCUGAGAAUUUUGAAUUUGGACCCAUAAUUUACAUAAAUAUUUUAGAGAACUUUAUAUAGAUCUAGAUUCAAAUUUCUUAGAAAAUUCUAGAAAUAUUUAUGUAUCUUAGUUUAUCUAAGAGAAGAUCUGUGUAAAAAUUGG |