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BaseInfo

ncRNA ID	novel_zma_miR5100
Species	Zea mays
Class	miRNA
Genome position	Chr9:157027322-157027381 [+]
Reference genome	RefGen_v4
Source	SRR2287164;SRR2287165
Length	21
Mature sequence(if miRNA)	1 - CGGAGGUGAUUGGAGGGGCUA - 21
Stem-loop(if miRNA)	--                         CCU   CGGAGGUGAUUGGAGGGGCUAGAAU   C   |||||||||||||||||||||||||   GCCUCCACUAACCUUCCCGAUCUUA   U UG                         UCC
Stem-loop sequence	CGGAGGUGAUUGGAGGGGCUAGAAUCCUCUCCUAUUCUAGCCCUUCCAAUCACCUCCGGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020539411.1	ncRNA:21   AUCGGGGAGGUUAGUGGAGGC   1   ||||||||||||||*|||||| targets:3500   UAGCCCCUCCAAUCCCCUCCG   3520 Target Full Sequence	1.5	PREDICTED: Zea mays Protein kinase superfamily protein (LOC100502407), transcript variant X7, mRNA	NA	coding protein	psRNATarget
XM_020539397.1	ncRNA:21   AUCGGGGAGGUUAGUGGAGGC   1   ||||||||||||||*|||||| targets:3535   UAGCCCCUCCAAUCCCCUCCG   3555 Target Full Sequence	1.5	PREDICTED: Zea mays Protein kinase superfamily protein (LOC100502407), transcript variant X3, mRNA	NA	coding protein	psRNATarget
BT065170.1	ncRNA:21   AUCGGGGAGGUUAGUGGAGGC   1   ||*|||||||||||*|||||| targets:684   UAUCCCCUCCAAUCCCCUCCG   704 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0017F16 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008667867.1	ncRNA:21   AUCGGGGAGGUUAGUGGAGGC   1   ||*|||||||||||*|||||| targets:1031   UAACCCCUCCAAUCCCCUCCG   1051 Target Full Sequence	2.5	PREDICTED: Zea mays 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase (LOC103644703), mRNA	NA	coding protein	psRNATarget
XM_008670893.2	ncRNA:21   AUCGGGGAGGUUAGUGGAGGC   1   ||*|||||||||||*|||||| targets:1564   UAUCCCCUCCAAUCCCCUCCG   1584 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100382722 (LOC100382722), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_008670890.2	ncRNA:21   AUCGGGGAGGUUAGUGGAGGC   1   ||*|||||||||||*|||||| targets:1584   UAUCCCCUCCAAUCCCCUCCG   1604 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100382722 (LOC100382722), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008670892.2	ncRNA:21   AUCGGGGAGGUUAGUGGAGGC   1   ||*|||||||||||*|||||| targets:1608   UAUCCCCUCCAAUCCCCUCCG   1628 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100382722 (LOC100382722), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008670891.2	ncRNA:21   AUCGGGGAGGUUAGUGGAGGC   1   ||*|||||||||||*|||||| targets:1641   UAUCCCCUCCAAUCCCCUCCG   1661 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100382722 (LOC100382722), transcript variant X2, mRNA	NA	coding protein	psRNATarget