| ncRNA ID | novel_zma_miR5077 |
| Species | Zea mays |
| Class | miRNA |
| Genome position | Chr8:89690727-89690942 [+] |
| Reference genome | RefGen_v4 |
| Source | SRR2287164 |
| Length | 21 |
| Mature sequence(if miRNA) | 196 - GCCGGCUCACCAUCGUCUGGC - 216 |
| Stem-loop(if miRNA) |
-- A A G G G G G U CAGACGAUGGUGAGCCGGUGUACU UGUCCG AUGUGUGGUCACAAAAUUUAAAGCCGCCCCGGCU CAU UGUGUGCUUCUCUUCUCUUA GU GG UGCUAAG G |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| || || ||||||| GUCUGCUACCACUCGGCCGCAUGA ACAGGC UACACACCAGUGUUUUAAAUUUCGGCGGGGCCGA GUA ACACGCGAAGAGAAGAGAAU CA CC AUGAUUC A CG G C A G A G G U |
| Stem-loop sequence | CAGACGAUGGUGAGCCGGUGUACUAUGUCCGAAUGUGUGGUCACAAAAUUUAAAGCCGCCCCGGCUGCAUGUGUGUGCUUCUCUUCUCUUAGGUGGGGUGCUAAGUGAUCUUAGUAGCCGACAUAAGAGAAGAGAAGCGCACAGAUGAAGCCGGGGCGGCUUUAAAUUUUGUGACCACACAUCCGGACAGAGUACGCCGGCUCACCAUCGUCUGGC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_020538582.1 |
|
1.0 | PREDICTED: Zea mays B3 domain-containing protein Os02g0598200 (LOC103628738), transcript variant X2, mRNA | NA | coding protein | psRNATarget | |||||||||
| XM_020538581.1 |
|
1.0 | PREDICTED: Zea mays B3 domain-containing protein Os02g0598200 (LOC103628738), transcript variant X1, mRNA | NA | coding protein | psRNATarget | |||||||||
| EU940887.1 |
|
2.0 | Zea mays clone 1166254 mRNA sequence | NA | coding protein | psRNATarget |