ncRNA ID | novel_zma_miR5075 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr5:193874605-193874713 [+] |
Reference genome | RefGen_v4 |
Source | SRR1618882 |
Length | 24 |
Mature sequence(if miRNA) | 86 - CCUCCGGUAUUUGGACUCCCAAAC - 109 |
Stem-loop(if miRNA) |
--       -   C  A       C                    U     AUAUU   UUGGGAG CCA AA ACCGGAG GGACUGGAGUGGCUAAAAUC CCCUC     G   ||||||| ||| || ||||||| |||||||||||||||||||| |||||   AACCCUC GGU UU UGGCCUC CCUGACCUCACCGAUUUUAG GGGAG     A CA       A   -  A       C                    -     GAAUA |
Stem-loop sequence | UUGGGAGCCACAAAACCGGAGCGGACUGGAGUGGCUAAAAUCUCCCUCAUAUUGAAUAAGGAGGGGAUUUUAGCCACUCCAGUCCCCUCCGGUAUUUGGACUCCCAAAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008669125.2 |
|
2.5 | PREDICTED: Zea mays Disease resistance protein RPS2 (LOC100216844), transcript variant X2, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_008669124.2 |
|
2.5 | PREDICTED: Zea mays Disease resistance protein RPS2 (LOC100216844), transcript variant X1, mRNA | NA | coding protein | psRNATarget |