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BaseInfo

ncRNA ID osa-miRf10104-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - CAGCCGCAUGCGAAAAUAGG - NA
Stem-loop(if miRNA)                         CA       CA  CG    CAA
AAUAGGCCUAUUUUCGCAUGUGGC  UCUUAAG  GC  CAUG   U
||||||||||||||||||||||||  |||||||  ||  ||||
UUAUCCGGAUAAAAGCGUACGCCG  AGAAUUC  CG  GUAC   A
                        AC       CC  AU    AUA
Stem-loop sequence AAUAGGCCUAUUUUCGCAUGUGGCCAUCUUAAGCAGCCGCAUGCAAUAAUACAUGUAGCCCCUUAAGACAGCCGCAUGCGAAAAUAGGCCUAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB164734.1
ncRNA:20   GGAUAAAAGCGUACGCCGAC   1
  =|||||||||||||||||||
targets:51   UCUAUUUUCGCAUGCGGCUG   70

0.0 Sequence 2398 from Patent EP2559767 NA coding protein psRNATarget
HI404273.1
ncRNA:20   GGAUAAAAGCGUACGCCGAC   1
  =|||||||||||||||||||
targets:51   UCUAUUUUCGCAUGCGGCUG   70

0.0 Sequence 2398 from Patent EP2074227 NA coding protein psRNATarget
LQ236403.1
ncRNA:20   GGAUAAAAGCGUACGCCGAC   1
  =|||||||||||||||||||
targets:51   UCUAUUUUCGCAUGCGGCUG   70

0.0 Sequence 2398 from Patent EP2985353 NA coding protein psRNATarget
AK243572.1
ncRNA:20   GGAUAAAAGCGUACGCCGAC   1
  ==||||||||||||||||*|
targets:785   UUUAUUUUCGCAUGCGGCCG   804

2.5 Oryza sativa Japonica Group cDNA, clone: J100082B16, full insert sequence NA coding protein psRNATarget