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BaseInfo

ncRNA ID novel_zma_miR5060
Species Zea mays
Class miRNA
Genome position Chr7:24468449-24468530 [-]
Reference genome RefGen_v4
Source SRR2287164
Length 24
Mature sequence(if miRNA) 59 - GGAUUACAGGAGGAUUGGAGGGGA - 82
Stem-loop(if miRNA) --      CA     -AU              UG      GA
  GGAUUA  GGAGG   UGGAGGGGAUUGAG  AGAAAU  A
  ||||||  |||||   ||||||||||||||  ||||||
  CCUAGU  CCUCC   ACUUCCCCUAACUC  UCUUUA  C
GU      -A     CUC              CU      AU
Stem-loop sequence GGAUUACAGGAGGAUUGGAGGGGAUUGAGUGAGAAAUGAACUAAUUUCUUCCUCAAUCCCCUUCACUCCCUCCAUGAUCCUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ082583.1
ncRNA:22   GGGAGGUUAGGAGGACAUUAGG   1
  ||=|=||||||||||||=||||
targets:1   CCUUUCAAUCCUCCUGUGAUCC   22

2.5 TSA: Zea mays contig18226, mRNA sequence NA coding protein psRNATarget