ncRNA ID | osa-miRf10103-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 23 |
Mature sequence(if miRNA) | NA - ACCUGGGUCCACAUGUCAGCCUC - NA |
Stem-loop(if miRNA) |
    -   AACC  GG                  U   CAUUCAAACAAAAGU CCAA UGC    UG  UCCACAUGUCAGCCUCAC UUC               G |||| |||    ||  |||||||||||||||||| ||| GGUU AUG    GC  GGGUGUACAGUCGGAGUG GGU               A     U   AUAA  UU                  -   AGUGGCCUAGGGUGC |
Stem-loop sequence | CCAAUGCAACCUGGGUCCACAUGUCAGCCUCACUUUCCAUUCAAACAAAAGUGACGUGGGAUCCGGUGAUGGGUGAGGCUGACAUGUGGGUUCGAAUAGUAUUUGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
CT837848.1 |
|
2.5 | Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA012I05, full insert sequence | NA | coding protein | psRNATarget | |||||||||
AK240809.1 |
|
2.5 | Oryza sativa Japonica Group cDNA, clone: J065006K12, full insert sequence | NA | coding protein | psRNATarget | |||||||||
XM_015768737.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group expansin-B16 (LOC9267660), mRNA | expansin-B16(LOC9267660) | coding protein | psRNATarget |