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BaseInfo

ncRNA ID osa-miRf10103-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 23
Mature sequence(if miRNA) NA - ACCUGGGUCCACAUGUCAGCCUC - NA
Stem-loop(if miRNA)     -   AACC  GG                  U   CAUUCAAACAAAAGU
CCAA UGC    UG  UCCACAUGUCAGCCUCAC UUC               G
|||| |||    ||  |||||||||||||||||| |||
GGUU AUG    GC  GGGUGUACAGUCGGAGUG GGU               A
    U   AUAA  UU                  -   AGUGGCCUAGGGUGC
Stem-loop sequence CCAAUGCAACCUGGGUCCACAUGUCAGCCUCACUUUCCAUUCAAACAAAAGUGACGUGGGAUCCGGUGAUGGGUGAGGCUGACAUGUGGGUUCGAAUAGUAUUUGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
CT837848.1
ncRNA:23   CUCCGACUGUACACCUGGGUCCA   1
  |=|*|||=|||||||=|||||||
targets:1065   GGGACUGGCAUGUGGGCCCAGGU   1087

2.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA012I05, full insert sequence NA coding protein psRNATarget
AK240809.1
ncRNA:23   CUCCGACUGUACACCUGGGUCCA   1
  |=|*|||=|||||||=|||||||
targets:952   GGGACUGGCAUGUGGGCCCAGGU   974

2.5 Oryza sativa Japonica Group cDNA, clone: J065006K12, full insert sequence NA coding protein psRNATarget
XM_015768737.1
ncRNA:23   CUCCGACUGUACACCUGGGUCCA   1
  |=|*|||=|||||||=|||||||
targets:1216   GGGACUGGCAUGUGGGCCCAGGU   1238

2.5 PREDICTED: Oryza sativa Japonica Group expansin-B16 (LOC9267660), mRNA expansin-B16(LOC9267660) coding protein psRNATarget