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BaseInfo

ncRNA ID novel_zma_miR5058
Species Zea mays
Class miRNA
Genome position Chr5:120144748-120144798 [+]
Reference genome RefGen_v4
Source SRR1618882;SRR1618883
Length 22
Mature sequence(if miRNA) 1 - UGAUGGAUCAAAUAGAAUUGUU - 22
Stem-loop(if miRNA) --  A        AU     UG   G
  UG UGGAUCAA  AGAAU  UUG A
  || ||||||||  |||||  |||
  AC AUUUAGUU  UUUUA  AGC C
AU  G        -C     GU   G
Stem-loop sequence UGAUGGAUCAAAUAGAAUUGUUGGACGCGAUGAUUUUCUUGAUUUAGCAUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ077560.1
ncRNA:22   UUGUUAAGAUAAACUAGGUAGU   1
  ||||||||||||||||||||||
targets:51   AACAAUUCUAUUUGAUCCAUCA   72

0.0 TSA: Zea mays contig13198, mRNA sequence NA coding protein psRNATarget