ncRNA ID | novel_zma_miR5047 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr6:152931428-152931471 [+] |
Reference genome | RefGen_v4 |
Source | SRR2287164 |
Length | 21 |
Mature sequence(if miRNA) | 24 - AGAGGAGUGGAACGAAGAGUG - 44 |
Stem-loop(if miRNA) |
---UUUA   G    A     AC        UGU CUAC UUUUU  U        ||| |||| |||||        GCA GGUG AGGAG  A GUGAGAA   A    -     AU |
Stem-loop sequence | UUUAUGUGCUACAUUUUUACUAUAGAGGAGUGGAACGAAGAGUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EU959765.1 |
|
2.5 | Zea mays clone 219894 eukaryotic translation initiation factor 4E type 3 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
EU973689.1 |
|
2.5 | Zea mays clone 406639 mRNA sequence | NA | coding protein | psRNATarget |