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BaseInfo

ncRNA ID novel_zma_miR5045
Species Zea mays
Class miRNA
Genome position Chr8:164054955-164055007 [+]
Reference genome RefGen_v4
Source SRR1583941
Length 22
Mature sequence(if miRNA) 32 - UAUAUUAUCUGUCUCUAAGGGC - 53
Stem-loop(if miRNA) -  UC    AG  UAGUAG      G
 CC  UGGA  CA      AUAGAG U
 ||  ||||  ||      ||||||
 GG  AUCU  GU      UAUCUC U
C  GA    CU  CUAUUA      U
Stem-loop sequence CCUCUGGAAGCAUAGUAGAUAGAGGUUUCUCUAUAUUAUCUGUCUCUAAGGGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT084181.2
ncRNA:22   CGGGAAUCUCUGUCUAUUAUAU   1
  ||||||||||||||||||||||
targets:79   GCCCUUAGAGACAGAUAAUAUA   100

0.0 Zea mays full-length cDNA clone ZM_BFb0086D03 mRNA, complete cds NA coding protein psRNATarget