ncRNA ID | novel_zma_miR5041 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr5:11305265-11305343 [-] |
Reference genome | RefGen_v4 |
Source | SRR1618882;SRR2287165;SRR1618883;SRR5100255;SRR5105961;SRR5105963 |
Length | 24 |
Mature sequence(if miRNA) | 56 - ACUUUUCUGGCAAGUCGGUCGACU - 79 |
Stem-loop(if miRNA) |
ACUUUU       --------   GGUCGACUUGCCAGCGACUGG       CUGGCAA        GUC                     A       |||||||        |||                     A       GCUGAUC        UCA                     U ------       AAGCUGGU   GCUGCUGAUCAGCUGAUUAUA |
Stem-loop sequence | ACUUUUCUGGCAAGUCGGUCGACUUGCCAGCGACUGGAAUAUAUUAGUCGACUAGUCGUCGACUUGGUCGAACUAGUCG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020547690.1 |
|
1.0 | PREDICTED: Zea mays SNARE-like superfamily protein (IDP117), transcript variant X1, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_020547691.1 |
|
1.0 | PREDICTED: Zea mays SNARE-like superfamily protein (IDP117), transcript variant X2, mRNA | NA | coding protein | psRNATarget |