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BaseInfo

ncRNA ID novel_zma_miR5040
Species Zea mays
Class miRNA
Genome position Chr6:643448-643541 [+]
Reference genome RefGen_v4
Source SRR2287164
Length 19
Mature sequence(if miRNA) 1 - GGGAGAAACGGUUGCAGAA - 19
Stem-loop(if miRNA) ---G       C  UU     AG   ---AA   ---A    UCGAC     CA
    GGAGAAA GG  GCAGA  GGC     CGU    GAGA     GAGCG  G
    ||||||| ||  |||||  |||     |||    ||||     |||||
    CCUCUUU UC  CGUCU  CCG     GCA    CUCU     CUCGU  A
CUCG       -  --     CA   CCGCC   AGAC    ----U     CA
Stem-loop sequence GGGAGAAACGGUUGCAGAAGGGCAACGUAGAGAUCGACGAGCGCAGAACUGCUCUUCUCCAGAACGCCGCCGCCACUCUGCCUUUUCUCCGCUC