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BaseInfo

ncRNA ID novel_zma_miR5038
Species Zea mays
Class miRNA
Genome position Chr6:31209006-31209069 [-]
Reference genome RefGen_v4
Source SRR2287164
Length 24
Mature sequence(if miRNA) 1 - CGGUGAACCACCGGACAUCGCACA - 24
Stem-loop(if miRNA) --   -          -CA     A     GCA
  UGC AUGUCCGGUG   CACUG ACAGC   C
  ||| ||||||||||   ||||| |||||
  ACG UACAGGCCAC   GUGGC UGUCG   A
AC   C          CAA     C     AUC
Stem-loop sequence UGCAUGUCCGGUGCACACUGAACAGCGCACACUAGCUGUCCGGUGAACCACCGGACAUCGCACA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB170455.1
ncRNA:24   ACACGCUACAGGCCACCAAGUGGC   1
  *|||-|*|||||||||||*|||||
targets:99   AGUG-GCUGUCCGGUGGUGCACCG   121

2.5 Sequence 8119 from Patent EP2559767 NA coding protein psRNATarget
LQ242124.1
ncRNA:24   ACACGCUACAGGCCACCAAGUGGC   1
  *|||-|*|||||||||||*|||||
targets:99   AGUG-GCUGUCCGGUGGUGCACCG   121

2.5 Sequence 8119 from Patent EP2985353 NA coding protein psRNATarget
HI409994.1
ncRNA:24   ACACGCUACAGGCCACCAAGUGGC   1
  *|||-|*|||||||||||*|||||
targets:99   AGUG-GCUGUCCGGUGGUGCACCG   121

2.5 Sequence 8119 from Patent EP2074227 NA coding protein psRNATarget