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BaseInfo

ncRNA ID novel_zma_miR5036
Species Zea mays
Class miRNA
Genome position Chr6:65157256-65157386 [-]
Reference genome RefGen_v4
Source SRR2287164;SRR2287165
Length 21
Mature sequence(if miRNA) 1 - AUACUGGGACAGAGGGAGUAU - 21
Stem-loop(if miRNA) --       UC      UA        A    -  CU    AUAAAU   ---U  UG      AAAU
  ACUCCCU  GUCCCA  AUAUAAAG CGUG CU  CUCU      ACG    GG  GUAUAU    A
  |||||||  ||||||  |||||||| |||| ||  ||||      |||    ||  ||||||
  UGAGGGA  CAGGGU  UAUAUUUC GUAU GG  GAGA      UGC    UC  UAUAUA    A
UA       GA      CA        -    U  UG    CUAAGU   UGAU  UU      AAUU
Stem-loop sequence ACUCCCUUCGUCCCAUAAUAUAAAGACGUGCUCUCUCUAUAAAUACGUGGUGGUAUAUAAAUAAUUAAAUAUAUUUCUUAGUCGUUGAAUCAGAGGUGGUUAUGCUUUAUAUACUGGGACAGAGGGAGUAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU974289.1
ncRNA:21   UAUGAGGGAGACAGGGUCAUA   1
  ||||||||||*||||||||||
targets:192   AUACUCCCUCCGUCCCAGUAU   212

1.5 Zea mays clone 445101 mRNA sequence NA coding protein psRNATarget