ncRNA ID | novel_zma_miR5036 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr6:65157256-65157386 [-] |
Reference genome | RefGen_v4 |
Source | SRR2287164;SRR2287165 |
Length | 21 |
Mature sequence(if miRNA) | 1 - AUACUGGGACAGAGGGAGUAU - 21 |
Stem-loop(if miRNA) |
--       UC      UA        A    -  CU    AUAAAU   ---U  UG      AAAU   ACUCCCU  GUCCCA  AUAUAAAG CGUG CU  CUCU      ACG    GG  GUAUAU    A   |||||||  ||||||  |||||||| |||| ||  ||||      |||    ||  ||||||   UGAGGGA  CAGGGU  UAUAUUUC GUAU GG  GAGA      UGC    UC  UAUAUA    A UA       GA      CA        -    U  UG    CUAAGU   UGAU  UU      AAUU |
Stem-loop sequence | ACUCCCUUCGUCCCAUAAUAUAAAGACGUGCUCUCUCUAUAAAUACGUGGUGGUAUAUAAAUAAUUAAAUAUAUUUCUUAGUCGUUGAAUCAGAGGUGGUUAUGCUUUAUAUACUGGGACAGAGGGAGUAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EU974289.1 |
|
1.5 | Zea mays clone 445101 mRNA sequence | NA | coding protein | psRNATarget |