ncRNA ID | novel_zma_miR5028 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr5:143336104-143336249 [+] |
Reference genome | RefGen_v4 |
Source | SRR2287164 |
Length | 23 |
Mature sequence(if miRNA) | 1 - AGGGAUGGAGGAGUAUACGGUUG - 23 |
Stem-loop(if miRNA) |
--A      GAG    ---    GG UG AUA   GAG  UG     --AGAG     --G    AAAAUAAAG   UA    GGGAUG   GAGU   AUAC  U  G   AGA   AC  GUAGA      UAAAA   GGAA         UAU  A    ||||||   ||||   ||||  |  |   |||   ||  |||||      |||||   ||||         |||    UCUUAU   CUCA   UAUG  G  U   UCU   UG  UAUUU      AUUUU   UCUU         GUG  U AGG      -AA    CUU    -A GU --G   -AG  GU     GGAGGG     GUA    GGGUGAACA   UA |
Stem-loop sequence | AGGGAUGGAGGAGUAUACGGUUGGAUAAGAGAGACUGGUAGAAGAGUAAAAGGGAAAAAAUAAAGUAUUAAUAUGUGACAAGUGGGUUCUAUGUUUUAGGGAGGUUUAUUGGUGAUCUGUUGGAGUAUUUCACUCAAUAUUCUGGA |