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BaseInfo

ncRNA ID novel_zma_miR5028
Species Zea mays
Class miRNA
Genome position Chr5:143336104-143336249 [+]
Reference genome RefGen_v4
Source SRR2287164
Length 23
Mature sequence(if miRNA) 1 - AGGGAUGGAGGAGUAUACGGUUG - 23
Stem-loop(if miRNA) --A      GAG    ---    GG UG AUA   GAG  UG     --AGAG     --G    AAAAUAAAG   UA
   GGGAUG   GAGU   AUAC  U  G   AGA   AC  GUAGA      UAAAA   GGAA         UAU  A
   ||||||   ||||   ||||  |  |   |||   ||  |||||      |||||   ||||         |||
   UCUUAU   CUCA   UAUG  G  U   UCU   UG  UAUUU      AUUUU   UCUU         GUG  U
AGG      -AA    CUU    -A GU --G   -AG  GU     GGAGGG     GUA    GGGUGAACA   UA
Stem-loop sequence AGGGAUGGAGGAGUAUACGGUUGGAUAAGAGAGACUGGUAGAAGAGUAAAAGGGAAAAAAUAAAGUAUUAAUAUGUGACAAGUGGGUUCUAUGUUUUAGGGAGGUUUAUUGGUGAUCUGUUGGAGUAUUUCACUCAAUAUUCUGGA