ncRNA ID | novel_zma_miR5017 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr5:166022387-166022473 [-] |
Reference genome | RefGen_v4 |
Source | SRR2287164 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGUUGGCUCUCGGCAAAGACUGAC - 24 |
Stem-loop(if miRNA) |
--  CG          U   U   AUG              GAA   CA  CUUUGCCGAG GCC ACU   UGGCACUCGGCAAA   U   ||  |||||||||| ||| |||   ||||||||||||||   GU  GAAACGGCUC CGG UGA   ACCGUGAGCCGUUU   C CA  CA          U   U   -CG              AUC |
Stem-loop sequence | CACGCUUUGCCGAGUGCCUACUAUGUGGCACUCGGCAAAGAAUCCUAUUUGCCGAGUGCCAGCAGUUGGCUCUCGGCAAAGACUGAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT063684.1 |
|
1.0 | Zea mays full-length cDNA clone ZM_BFc0094N19 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
NM_001175015.1 |
|
1.0 | Zea mays uncharacterized LOC100382263 (LOC100382263), mRNA | NA | coding protein | psRNATarget |