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BaseInfo

ncRNA ID	novel_zma_miR5015
Species	Zea mays
Class	miRNA
Genome position	Chr5:219973741-219973822 [+]
Reference genome	RefGen_v4
Source	SRR2287164
Length	21
Mature sequence(if miRNA)	1 - GGAGAGAAUUGGAGGGGCUAA - 21
Stem-loop(if miRNA)	--GG    A    GA           UCCCUAA     CAAUUU     AGAG AUUG  GGGGCUAAAAU       CUCUU      U     |||| ||||  |||||||||||       |||||      A     UCUC UAAC  CCCCGAUUUUA       GAGAA      A AUUG    A    UC           -------     ACGAUA
Stem-loop sequence	GGAGAGAAUUGGAGGGGCUAAAAUUCCCUAACUCUUCAAUUUUAAAUAGCAAAGAGAUUUUAGCCCCCUCAAUACUCUGUUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ235519.1	ncRNA:21   AAUCGGGGAGGUUAAGAGAGG   1   ||||||||||||||||*|||| targets:73   UUAGCCCCUCCAAUUCCCUCC   93 Target Full Sequence	1.5	Sequence 1514 from Patent EP2985353	NA	coding protein	psRNATarget
HI403389.1	ncRNA:21   AAUCGGGGAGGUUAAGAGAGG   1   ||||||||||||||||*|||| targets:73   UUAGCCCCUCCAAUUCCCUCC   93 Target Full Sequence	1.5	Sequence 1514 from Patent EP2074227	NA	coding protein	psRNATarget
JB163850.1	ncRNA:21   AAUCGGGGAGGUUAAGAGAGG   1   ||||||||||||||||*|||| targets:73   UUAGCCCCUCCAAUUCCCUCC   93 Target Full Sequence	1.5	Sequence 1514 from Patent EP2559767	NA	coding protein	psRNATarget
EU957568.1	ncRNA:21   AAUCGGGGAGGUUAAGAGAGG   1   |||||*|*||||||||||||| targets:914   UUAGCGCAUCCAAUUCUCUCC   934 Target Full Sequence	2.0	Zea mays clone 1597470 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
XM_008676858.2	ncRNA:21   AAUCGGGGAGGUUAAGAGAGG   1   **|||*|||||||||||=||| targets:74   CAAGCACCUCCAAUUCUUUCC   94 Target Full Sequence	2.5	PREDICTED: Zea mays hypothetical protein (LOC100276015), mRNA	NA	coding protein	psRNATarget