Search result

BaseInfo

ncRNA ID	novel_zma_miR5005
Species	Zea mays
Class	miRNA
Genome position	Chr10:109174567-109174741 [-]
Reference genome	RefGen_v4
Source	SRR2287164;SRR2287165
Length	21
Mature sequence(if miRNA)	1 - AUACAGUGGUAGAGUAGGCAA - 21
Stem-loop(if miRNA)	--A                         A           C            AAAAUACAA                 G   CAAAAA    CCUACUCUACCACUGUAUAAAAUUU AAGUUCAAAUU AUCAUAUGUUAA         AAAAGAGAAAAUUGUGA AUA      A    ||||||||||||||||||||||||| ||||||||||| ||||||||||||         ||||||||||||||||| |||      G    GGAUGAGAUGGUGACAUAUUUUAAA UUCAAGUUUAA UAGUAUAUAAUU         UUUUUUCUUUUAAUACU UAU      U AAC                         A           A            ----CUCUA                 A   UAAAAG
Stem-loop sequence	ACCUACUCUACCACUGUAUAAAAUUUAAAGUUCAAAUUCAUCAUAUGUUAAAAAAUACAAAAAAGAGAAAAUUGUGAGAUACAAAAAAGUGAAAAUUAUAUCAUAAUUUUCUUUUUUAUCUCUUAAUAUAUGAUAAAUUUGAACUUAAAAUUUUAUACAGUGGUAGAGUAGGCAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008657758.2	ncRNA:21   AACGGAUGAGAUGGUGACAUA   1   |*||||||*|||||||||||* targets:42   UAGCCUACGCUACCACUGUAG   62 Target Full Sequence	2.5	PREDICTED: Zea mays methylesterase 7 (LOC103635265), mRNA	NA	coding protein	psRNATarget