ncRNA ID | novel_zma_miR5002 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr4:11121617-11121780 [+] |
Reference genome | RefGen_v4 |
Source | SRR2287164;SRR5451006;SRR2089708 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAGGAACUGCAAGUGGAAAUAUAU - 24 |
Stem-loop(if miRNA) |
--         CA          U   UU                                     AA  UAUUU        G   AAGGAACUG  AGUGGAAAUA AUU  CAUUGGCGGUUCUCUUUACACAAUCGCUAGUGAAAAU  AG     UUAUUGGU G   |||||||||  |||||||||| |||  |||||||||||||||||||||||||||||||||||||  ||     |||||||| U   UUCUUUGGC  UCACCUUUGU UAA  GUGAUCGUCAAGAGAAGUGUGUUGGCGGUCACUUUUA  UC     AAUAGCCA U AA         AG          U   GG                                     -A  ----U        G |
Stem-loop sequence | AAGGAACUGCAAGUGGAAAUAUAUUUUCAUUGGCGGUUCUCUUUACACAAUCGCUAGUGAAAAUAAAGUAUUUUUAUUGGUGGUUGACCGAUAAUCUAAUUUUCACUGGCGGUUGUGUGAAGAGAACUGCUAGUGGGAAUUUGUUUCCACUGACGGUUUCUUAA |