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BaseInfo

ncRNA ID novel_zma_miR5001
Species Zea mays
Class miRNA
Genome position Chr10:119897905-119897961 [-]
Reference genome RefGen_v4
Source SRR1618882;SRR1618883
Length 24
Mature sequence(if miRNA) 34 - UAGAGAAGGCCGUAGGAAGUUAGC - 57
Stem-loop(if miRNA) --     AA                 UG
  UAGAG  GGCCGUAGGAAGUUAGC  C
  |||||  |||||||||||||||||  C
  AUCUC  UCGGCAUCUUUCAAUCG  C
GG     CG                 UA
Stem-loop sequence UAGAGAAGGCCGUAGGAAGUUAGCUGCCCAUGCUAACUUUCUACGGCUGCCUCUAGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT086229.2
ncRNA:24   CGAUUGAAGGAUGCCGGAAGAGAU   1
  ||||||||=|||||||||*|||||
targets:1130   GCUAACUUUCUACGGCCUCCUCUA   1153

2.5 Zea mays full-length cDNA clone ZM_BFc0134M03 mRNA, complete cds NA coding protein psRNATarget