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BaseInfo

ncRNA ID	novel_zma_miR4999
Species	Zea mays
Class	miRNA
Genome position	Chr4:1827888-1827951 [-]
Reference genome	RefGen_v4
Source	SRR2287164;SRR2287165
Length	24
Mature sequence(if miRNA)	1 - CUCGGUAAAGUUAGGAUCUCGGCA - 24
Stem-loop(if miRNA)	--     U   G  UU               UU   CCGAG GUU UA  CUUUGCCGAGUGUUU  U   ||||| ||| ||  |||||||||||||||   GGCUC UAG AU  GAAAUGGCUCACGGG  G AC     -   G  -U               CU
Stem-loop sequence	CCGAGUGUUGUAUUCUUUGCCGAGUGUUUUUUGUCGGGCACUCGGUAAAGUUAGGAUCUCGGCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ237992.1	ncRNA:24   ACGGCUCUAGGAUUGAAAUGGCUC   1   ||||||||||||||||||=||||| targets:154   UGCCGAGAUCCUAACUUUGCCGAG   177 Target Full Sequence	1.5	Sequence 3987 from Patent EP2985353	NA	coding protein	psRNATarget
JB166323.1	ncRNA:24   ACGGCUCUAGGAUUGAAAUGGCUC   1   ||||||||||||||||||=||||| targets:154   UGCCGAGAUCCUAACUUUGCCGAG   177 Target Full Sequence	1.5	Sequence 3987 from Patent EP2559767	NA	coding protein	psRNATarget
HI405862.1	ncRNA:24   ACGGCUCUAGGAUUGAAAUGGCUC   1   ||||||||||||||||||=||||| targets:154   UGCCGAGAUCCUAACUUUGCCGAG   177 Target Full Sequence	1.5	Sequence 3987 from Patent EP2074227	NA	coding protein	psRNATarget
AF439722.1	ncRNA:24   ACGGCUCUAGGAUUGAAAUGGCUC   1   **||*|||||||||||*||||||* targets:427   AUCCCAGAUCCUAACUCUACCGAU   450 Target Full Sequence	2.5	Zea mays S-adenosyl-L-homocysteine hydrolase mRNA, partial cds	NA	coding protein	psRNATarget