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BaseInfo

ncRNA ID	novel_zma_miR4991
Species	Zea mays
Class	miRNA
Genome position	Chr5:205927386-205927486 [-]
Reference genome	RefGen_v4
Source	SRR1618882
Length	21
Mature sequence(if miRNA)	1 - GAUUUGUGUUCCCAAACUAGC - 21
Stem-loop(if miRNA)	--        A   U           ----------U       -   G     UA   UAGUUUGG AAC CAAAUUCCCUC           GGGAUUG AGG AAAAU  G   |||||||| ||| |||||||||||           ||||||| ||| |||||   AUCAAACC UUG GUUUAGGGGAG           CCCUAAC UCU UUUUA  U CG        C   U           UCCCCAACCUC       C   G     UU
Stem-loop sequence	UAGUUUGGAAACUCAAAUUCCCUCUGGGAUUGAGGGAAAAUUAGUUUAUUUUGUCUCCAAUCCCCUCCAACCCCUGAGGGGAUUUGUGUUCCCAAACUAGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB166927.1	ncRNA:21   CGAUCAAACCCUUGUGUUUAG   1   ||||||||||||||||*|||= targets:3   GCUAGUUUGGGAACACCAAUU   23 Target Full Sequence	2.5	Sequence 4591 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238596.1	ncRNA:21   CGAUCAAACCCUUGUGUUUAG   1   ||||||||||||||||*|||= targets:3   GCUAGUUUGGGAACACCAAUU   23 Target Full Sequence	2.5	Sequence 4591 from Patent EP2985353	NA	coding protein	psRNATarget
HI406466.1	ncRNA:21   CGAUCAAACCCUUGUGUUUAG   1   ||||||||||||||||*|||= targets:3   GCUAGUUUGGGAACACCAAUU   23 Target Full Sequence	2.5	Sequence 4591 from Patent EP2074227	NA	coding protein	psRNATarget
EZ069250.1	ncRNA:21   CGAUCAAACCCUUGUGUUUAG   1   ||||||||||||||||*|||= targets:65   GCUAGUUUGGGAACACCAAUU   85 Target Full Sequence	2.5	TSA: Zea mays contig04885, mRNA sequence	NA	coding protein	psRNATarget
EU967323.1	ncRNA:21   CGAUCAAACCCUUGUGUUUAG   1   ||||||||||||||||*|||= targets:879   GCUAGUUUGGGAACACCAAUU   899 Target Full Sequence	2.5	Zea mays clone 301481 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
NM_001150835.1	ncRNA:21   CGAUCAAACCCUUGUGUUUAG   1   ||||||||||||||||*|||= targets:879   GCUAGUUUGGGAACACCAAUU   899 Target Full Sequence	2.5	Zea mays ER membrane protein complex subunit 7-like protein (LOC100277198), mRNA	NA	coding protein	psRNATarget
XM_008660198.2	ncRNA:21   CGAUCAAACCCUUGUGUUUAG   1   ||||||||||||||||*|||= targets:912   GCUAGUUUGGGAACACCAAUU   932 Target Full Sequence	2.5	PREDICTED: Zea mays ER membrane protein complex subunit 7-like protein (LOC100277198), transcript variant X1, mRNA	NA	coding protein	psRNATarget
EU944975.1	ncRNA:21   CGAUCAAACCCUU-GUGUUUAG   1   |*|||||||||||-|||||||| targets:724   GAUAGUUUGGGAAACACAAAUC   745 Target Full Sequence	3.0	Zea mays clone 236700 mRNA sequence	NA	coding protein	psRNATarget