ncRNA ID | novel_zma_miR4982 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr10:8637250-8637432 [+] |
Reference genome | RefGen_v4 |
Source | SRR2287164 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AACUUUCUAGAGGCGGCCGUAGGA - 24 |
Stem-loop(if miRNA) |
--         G   C                        G           C  - C   UC            UUUUA   GC     UGC   AACUUUCUA AGG GGCCGUAGGAAGUUAGCAUGGGCA CUAACUUCCUA GG C UCC  UAGGAAGUUAGC     GUU  UGAUC   G   ||||||||| ||| |||||||||||||||||||||||| ||||||||||| || | |||  ||||||||||||     |||  |||||   G   UUGAAGGAU UCC CCGGCAUCCUUCAAUCGUACCUGU GAUUGAAGGAU UC G AGG  AUCCUUCAAUCG     CAA  ACUGG   G GA         A   U                        A           C  A C   -C            CCGAG   --     UGU |
Stem-loop sequence | AACUUUCUAGAGGCGGCCGUAGGAAGUUAGCAUGGGCAGCUAACUUCCUACGGCCUCCUCUAGGAAGUUAGCUUUUAGUUGCUGAUCUGCGGGUGUGGUCAAACGAGCCGCUAACUUCCUACGGACGACUCUAGGAAGUUAGAUGUCCAUGCUAACUUCCUACGGCCUCCUAUAGGAAGUUAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT086229.2 |
|
1.0 | Zea mays full-length cDNA clone ZM_BFc0134M03 mRNA, complete cds | NA | coding protein | psRNATarget |