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BaseInfo

ncRNA ID	novel_zma_miR4981
Species	Zea mays
Class	miRNA
Genome position	Chr4:238816530-238816619 [-]
Reference genome	RefGen_v4
Source	SRR2287164
Length	22
Mature sequence(if miRNA)	69 - UGAUUGAGGGGGAUUGGAGGGG - 90
Stem-loop(if miRNA)	--U                                         A    GAUUGAGGGGGAUUGGAGGGGAUUAAAUCCCCUCCUAUACA A    |||||||||||||||||||||||||||||||||||||||||    CUAACUCCCCCUAACCUCCCCUAAUUUAGGGGAGGAUAUGU U CAC                                         U
Stem-loop sequence	UGAUUGAGGGGGAUUGGAGGGGAUUAAAUCCCCUCCUAUACAAAUUUGUAUAGGAGGGGAUUUAAUCCCCUCCAAUCCCCCUCAAUCCAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020552749.1	ncRNA:22   GGGGAGGUUAGGGGGAGUUAGU   1   |||||||||||||||||||||* targets:3274   CCCCUCCAAUCCCCCUCAAUCC   3295 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized LOC103654236 (LOC103654236), mRNA	NA	coding protein	psRNATarget
NM_001176181.1	ncRNA:22   GGGGAGGUUAGGGGGAGUUAGU   1   |||||||||||||||||||||* targets:1595   CCCCUCCAAUCCCCCUCAAUCC   1616 Target Full Sequence	1.0	Zea mays uncharacterized LOC100383533 (LOC100383533), mRNA	NA	coding protein	psRNATarget
BT067503.1	ncRNA:22   GGGGAGGUUAGGGGGAGUUAGU   1   |||||||||||||||||||||* targets:1595   CCCCUCCAAUCCCCCUCAAUCC   1616 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFc0066C23 mRNA, complete cds	NA	coding protein	psRNATarget
EZ083462.1	ncRNA:22   GGGGAGGUUAGGGGGAGUUAGU   1   |||=|||||||||||||||||* targets:34   CCCUUCCAAUCCCCCUCAAUCC   55 Target Full Sequence	2.0	TSA: Zea mays contig19106, mRNA sequence	NA	coding protein	psRNATarget
BT061531.2	ncRNA:22   GGGGAGGUUAGGGGGAGUUAGU   1   |||||=|||||||||||||||* targets:844   CCCCUUCAAUCCCCCUCAAUCC   865 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0155L17 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020551510.1	ncRNA:22   GGGGAGGUUAGGGGGAGUUAGU   1   ||||||||||||||||||||=* targets:1569   CCCCUCCAAUCCCCCUCAAUUC   1590 Target Full Sequence	2.5	PREDICTED: Zea mays putative ACT-domain containing protein kinase family protein (LOC100280199), transcript variant X2, mRNA	NA	coding protein	psRNATarget
EZ069159.1	ncRNA:22   GGGGAGGUUAGGGGGAGUUAGU   1   ||=|||||||||||=||||||* targets:59   CCUCUCCAAUCCCCUUCAAUCC   80 Target Full Sequence	2.5	TSA: Zea mays contig04794, mRNA sequence	NA	coding protein	psRNATarget
XM_020547439.1	ncRNA:22   GGGGAGGUUAGGGGGAGUUAGU   1   ||*||||||||||||||||||* targets:3922   CCACUCCAAUCCCCCUCAAUCC   3943 Target Full Sequence	1.0	PREDICTED: Zea mays hypothetical protein (LOC100194067), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008661613.2	ncRNA:22   GGGGAGGUUAGGGGGAGUUAGU   1   ||*||||||||||=|||||||* targets:3042   CCACUCCAAUCCCUCUCAAUCC   3063 Target Full Sequence	2.5	PREDICTED: Zea mays two-component response regulator ORR25 (LOC103638799), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008661611.2	ncRNA:22   GGGGAGGUUAGGGGGAGUUAGU   1   ||*||||||||||=|||||||* targets:3047   CCACUCCAAUCCCUCUCAAUCC   3068 Target Full Sequence	2.5	PREDICTED: Zea mays two-component response regulator ORR25 (LOC103638799), transcript variant X1, mRNA	NA	coding protein	psRNATarget