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BaseInfo

ncRNA ID novel_zma_miR4980
Species Zea mays
Class miRNA
Genome position Chr4:242299193-242299247 [+]
Reference genome RefGen_v4
Source SRR2287164;SRR2089704
Length 24
Mature sequence(if miRNA) 32 - AAACACGCGAGGAGAUAGGAGUUU - 55
Stem-loop(if miRNA) --U    AAC       -   G     AA
   CUCC   AUCUCCU GCG GUUUA  G
   ||||   ||||||| ||| |||||
   GAGG   UAGAGGA CGC CAAAU  G
UUU    --A       G   A     CG
Stem-loop sequence UCUCCAACAUCUCCUGCGGGUUUAAAGGGCUAAACACGCGAGGAGAUAGGAGUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU940835.1
ncRNA:24   UUUGAGGAUAGAGGAGCGCACAAA   1
  ||=|||||*||||||||=||||||
targets:354   AAGCUCCUUUCUCCUCGUGUGUUU   377

2.5 Zea mays clone 1158151 mRNA sequence NA coding protein psRNATarget